A practical overview of protein disorder prediction methods F Ferron, S Longhi, B Canard, D Karlin Proteins: Structure, Function, and Bioinformatics 65 (1), 1-14, 2006 | 343 | 2006 |
2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales JH Kuhn, S Adkins, D Alioto, SV Alkhovsky, GK Amarasinghe, SJ Anthony, ... Archives of virology 165 (12), 3023-3072, 2020 | 341 | 2020 |
The C-terminal domain of the measles virus nucleoprotein is intrinsically disordered and folds upon binding to the C-terminal moiety of the phosphoprotein S Longhi, V Receveur-Bréchot, D Karlin, K Johansson, H Darbon, ... Journal of Biological Chemistry 278 (20), 18638, 2003 | 327 | 2003 |
Structural disorder and modular organization in Paramyxovirinae N and P D Karlin, F Ferron, B Canard, S Longhi Journal of general virology 84 (12), 3239, 2003 | 201 | 2003 |
Overlapping genes produce proteins with unusual sequence properties and offer insight into de novo protein creation C Rancurel, M Khosravi, AK Dunker, PR Romero, D Karlin Journal of virology 83 (20), 10719, 2009 | 188 | 2009 |
Evolution of viral proteins originated de novo by overprinting N Sabath, A Wagner, D Karlin Molecular biology and evolution 29 (12), 3767-3780, 2012 | 153 | 2012 |
The N-terminal domain of the phosphoprotein of morbilliviruses belongs to the natively unfolded class of proteins D Karlin, S Longhi, V Receveur, B Canard Virology 296 (2), 251-262, 2002 | 126 | 2002 |
Powerful sequence similarity search methods and in-depth manual analyses can identify remote homologs in many apparently “orphan” viral proteins DB Kuchibhatla, WA Sherman, BYW Chung, S Cook, G Schneider, ... Journal of virology 88 (1), 10-20, 2014 | 101 | 2014 |
Substitution of two residues in the measles virus nucleoprotein results in an impaired self-association D Karlin, S Longhi, B Canard Virology 302 (2), 420-432, 2002 | 97 | 2002 |
Sequence analysis reveals a conserved extension in the capping enzyme of the alphavirus supergroup, and a homologous domain in nodaviruses T Ahola, DG Karlin Biology direct 10, 1-21, 2015 | 96 | 2015 |
Viral Proteins Originated De Novo by Overprinting Can Be Identified by Codon Usage: Application to the “Gene Nursery” of Deltaretroviruses A Pavesi, G Magiorkinis, DG Karlin PLoS computational biology 9 (8), e1003162, 2013 | 77 | 2013 |
Detecting Remote Sequence Homology in Disordered Proteins: Discovery of Conserved Motifs in the N-Termini of Mononegavirales phosphoproteins D Karlin, R Belshaw PloS one 7 (3), e31719, 2012 | 71 | 2012 |
Overlapping genes and the proteins they encode differ significantly in their sequence composition from non-overlapping genes A Pavesi, A Vianelli, N Chirico, Y Bao, O Blinkova, R Belshaw, A Firth, ... PloS one 13 (10), e0202513, 2018 | 56 | 2018 |
Experimental and bioinformatic evidence that raspberry leaf blotch emaravirus P4 is a movement protein of the 30K superfamily C Yu, DG Karlin, Y Lu, K Wright, J Chen, S MacFarlane Journal of General Virology 94 (9), 2117-2128, 2013 | 54 | 2013 |
Evolution and Structural Organization of the C Proteins of Paramyxovirinae MK Lo, TM Søgaard, DG Karlin PLoS One 9 (2), e90003, 2014 | 34 | 2014 |
Characterisation of a novel Emaravirus identified in mosaic‐diseased Eurasian aspen (Populus tremula) S von Bargen, R Al Kubrusli, T Gaskin, S Fürl, F Hüttner, DR Blystad, ... Annals of Applied Biology 176 (2), 210-222, 2020 | 31 | 2020 |
Bioinformatic and mutational analysis of ophiovirus movement proteins, belonging to the 30K superfamily MB Borniego, D Karlin, EJ Peña, GR Luna, ML García Virology 498, 172-180, 2016 | 20 | 2016 |
Creative research science experiences for high school students C Hammond, D Karlin, J Thimonier PLoS Biology 8 (9), e1000447, 2010 | 20 | 2010 |
A novel emaravirus comprising five RNA segments is associated with ringspot disease in oak M Rehanek, S von Bargen, M Bandte, DG Karlin, C Büttner Archives of Virology 166, 987-990, 2021 | 17 | 2021 |
A conserved region in the Closterovirus 1a polyprotein drives extensive remodeling of endoplasmic reticulum membranes and induces motile globules in Nicotiana benthamiana cells VA Gushchin, DG Karlin, AV Makhotenko, AV Khromov, TN Erokhina, ... Virology 502, 106-113, 2017 | 15 | 2017 |