Rational design of hyperstable antibacterial peptides for food preservation YL Vishweshwaraiah, A Acharya, V Hegde, B Prakash npj Science of Food 5 (1), 26, 2021 | 30 | 2021 |
Improved sampling and free energy estimates for antibiotic permeation through bacterial porins A Acharya, JD Prajapati, U Kleinekathöfer Journal of Chemical Theory and Computation 17 (7), 4564-4577, 2021 | 16 | 2021 |
Drug Target Identification and Prioritization for Treatment of Ovine Foot Rot: An In Silico Approach A Acharya, LC Garg International journal of genomics 2016 (1), 7361361, 2016 | 15 | 2016 |
Disrupting domain-domain interactions is indispensable for EngA-ribosome interactions S Majumdar, A Acharya, SK Tomar, B Prakash Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1865 (3), 289-303, 2017 | 11 | 2017 |
Conformational dynamics of loop L3 in OmpF: implications toward antibiotic translocation and voltage gating A Acharya, I Ghai, C Piselli, JD Prajapati, R Benz, M Winterhalter, ... Journal of Chemical Information and Modeling 63 (3), 910-927, 2022 | 10 | 2022 |
Atomistic simulation of molecules interacting with biological nanopores: from current understanding to future directions A Acharya, JD Prajapati, U Kleinekathöfer The Journal of Physical Chemistry B 126 (22), 3995-4008, 2022 | 9 | 2022 |
Structural plasticity mediates distinct GAP‐dependent GTP hydrolysis mechanisms in Rab33 and Rab5 S Majumdar, A Acharya, B Prakash The FEBS journal 284 (24), 4358-4375, 2017 | 4 | 2017 |
Fast prediction of antibiotic permeability through membrane channels using Brownian dynamics A Acharya, K Jana, D Gurvic, U Zachariae, U Kleinekathöfer Biophysical Journal 122 (14), 2996-3007, 2023 | 2 | 2023 |
Structural basis of noncanonical polyphenol oxidase activity in DLL‐II: A lectin from Dolichos lablab Y L. Vishweshwaraiah, A Acharya, B Prakash Biotechnology and Applied Biochemistry 65 (5), 701-717, 2018 | 2 | 2018 |
Antibiotic charge profile determines the extent of L3 dynamics in OmpF: an expedited passage for molecules with a positive charge A Acharya, K Jana, U Kleinekathöfer The Journal of Physical Chemistry B 127 (50), 10766-10777, 2023 | 1 | 2023 |
Transport through bacterial membrane pores: insights from enhanced sampling simulations A Acharya, JD Prajapati, U Kleinekathoefer Biophysical Journal 121 (3), 134a, 2022 | | 2022 |
Antimicrobial peptide and its use thereof B Prakash, Y Linganamane, A Acharya US Patent 11,142,562, 2021 | | 2021 |
Molecular docking analysis of Clostridium perfringens beta toxin model with potential inhibitors from the ZINC database AK Solanki, A Acharya, H Kaushik, B Bhatia, LC Garg Bioinformation 17 (6), 628, 2021 | | 2021 |
Functional Implications of Disordered Terminal Regions of Macrotyloma uniflorum Bowman-Birk Inhibitors: A Molecular Dynamics Study A Acharya bioRxiv, 125807, 2017 | | 2017 |