Fiji: an open-source platform for biological-image analysis J Schindelin, I Arganda-Carreras, E Frise, V Kaynig, M Longair, T Pietzsch, ... Nature methods 9 (7), 676-682, 2012 | 55789 | 2012 |
Globally optimal stitching of tiled 3D microscopic image acquisitions S Preibisch, S Saalfeld, P Tomancak Bioinformatics 25 (11), 1463-1465, 2009 | 2419 | 2009 |
Global analysis of mRNA localization reveals a prominent role in organizing cellular architecture and function E Lécuyer, H Yoshida, N Parthasarathy, C Alm, T Babak, T Cerovina, ... Cell 131 (1), 174-187, 2007 | 1098 | 2007 |
Content-aware image restoration: pushing the limits of fluorescence microscopy M Weigert, U Schmidt, T Boothe, A Müller, A Dibrov, A Jain, B Wilhelm, ... Nature methods 15 (12), 1090-1097, 2018 | 1011 | 2018 |
Computational identification of DrosophilamicroRNA genes EC Lai, P Tomancak, RW Williams, GM Rubin Genome biology 4, 1-20, 2003 | 1004 | 2003 |
TrakEM2 software for neural circuit reconstruction A Cardona, S Saalfeld, J Schindelin, I Arganda-Carreras, S Preibisch, ... PloS one 7 (6), e38011, 2012 | 966 | 2012 |
RNA buffers the phase separation behavior of prion-like RNA binding proteins S Maharana, J Wang, DK Papadopoulos, D Richter, A Pozniakovsky, ... Science 360 (6391), 918-921, 2018 | 930 | 2018 |
Systematic determination of patterns of gene expression during Drosophila embryogenesis P Tomancak, A Beaton, R Weiszmann, E Kwan, SQ Shu, SE Lewis, ... Genome biology 3, 1-14, 2002 | 832 | 2002 |
Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome BP Berman, Y Nibu, BD Pfeiffer, P Tomancak, SE Celniker, M Levine, ... Proceedings of the National Academy of Sciences 99 (2), 757-762, 2002 | 765 | 2002 |
Biological imaging software tools KW Eliceiri, MR Berthold, IG Goldberg, L Ibáñez, BS Manjunath, ... Nature methods 9 (7), 697-710, 2012 | 628 | 2012 |
An objective comparison of cell-tracking algorithms V Ulman, M Maška, KEG Magnusson, O Ronneberger, C Haubold, ... Nature methods 14 (12), 1141-1152, 2017 | 563 | 2017 |
Global analysis of patterns of gene expression during Drosophilaembryogenesis P Tomancak, BP Berman, A Beaton, R Weiszmann, E Kwan, ... Genome biology 8, 1-24, 2007 | 536 | 2007 |
Tissue clearing and its applications in neuroscience HR Ueda, A Ertürk, K Chung, V Gradinaru, A Chédotal, P Tomancak, ... Nature Reviews Neuroscience 21 (2), 61-79, 2020 | 480 | 2020 |
Gene expression divergence recapitulates the developmental hourglass model AT Kalinka, KM Varga, DT Gerrard, S Preibisch, DL Corcoran, J Jarrells, ... Nature 468 (7325), 811-814, 2010 | 477 | 2010 |
Software for bead-based registration of selective plane illumination microscopy data S Preibisch, S Saalfeld, J Schindelin, P Tomancak Nature methods 7 (6), 418-419, 2010 | 444 | 2010 |
An Integrated Micro- and Macroarchitectural Analysis of the Drosophila Brain by Computer-Assisted Serial Section Electron Microscopy A Cardona, S Saalfeld, S Preibisch, B Schmid, A Cheng, J Pulokas, ... PLoS biology 8 (10), e1000502, 2010 | 427 | 2010 |
Assessing phototoxicity in live fluorescence imaging PP Laissue, RA Alghamdi, P Tomancak, EG Reynaud, H Shroff Nature methods 14 (7), 657-661, 2017 | 413 | 2017 |
CATMAID: collaborative annotation toolkit for massive amounts of image data S Saalfeld, A Cardona, V Hartenstein, P Tomančák Bioinformatics 25 (15), 1984-1986, 2009 | 375 | 2009 |
OpenSPIM: an open-access light-sheet microscopy platform PG Pitrone, J Schindelin, L Stuyvenberg, S Preibisch, M Weber, ... Nature methods 10 (7), 598-599, 2013 | 370 | 2013 |
A genome-wide resource for the analysis of protein localisation in Drosophila M Sarov, C Barz, H Jambor, MY Hein, C Schmied, D Suchold, B Stender, ... elife 5, e12068, 2016 | 342 | 2016 |