| SLTCAP: A simple method for calculating the number of ions needed for MD simulation JD Schmit, NL Kariyawasam, V Needham, PE Smith Journal of chemical theory and computation 14 (4), 1823-1827, 2018 | 57 | 2018 |
| Rationally designed peptide nanosponges for cell-based cancer therapy H Wang, AS Yapa, NL Kariyawasam, TB Shrestha, M Kalubowilage, ... Nanomedicine: Nanotechnology, Biology and Medicine 13 (8), 2555-2564, 2017 | 20 | 2017 |
| Kirkwood–Buff-Derived Force Field for Peptides and Proteins: Philosophy and Development of KBFF20 EA Ploetz, S Karunaweera, N Bentenitis, F Chen, S Dai, MB Gee, Y Jiao, ... Journal of Chemical Theory and Computation 17 (5), 2964-2990, 2021 | 17 | 2021 |
| Peptide nanosponges designed for rapid uptake by leukocytes and neural stem cells AS Yapa, H Wang, SO Wendel, TB Shrestha, NL Kariyawasam, ... RSC Advances 8 (29), 16052-16060, 2018 | 9 | 2018 |
| Computer simulations of small molecules and proteins in solution NL Kariyawasam Manachchige | 2 | 2019 |
| Modeling allosteric mechanisms of eukaryotic type II topoisomerases S Evoli, NL Kariyawasam, KC Nitiss, JL Nitiss, J Wereszczynski Biophysical Journal, 2024 | | 2024 |
| The Influence of Ionic Environment on Nucleosome-Mica Interactions Revealed via Molecular Dynamics Simulations NL Kariyawasam, J Wereszczynski bioRxiv, 2024.06. 25.600666, 2024 | | 2024 |
| Simulated pressure changes in LacI suggest a link between hydration and functional conformational changes NL Kariyawasam, EA Ploetz, L Swint-Kruse, PE Smith Biophysical Chemistry 304, 107126, 2024 | | 2024 |
| Nucleosome binding to the mica surface under different ionic environments NL Kariyawasam, JM Wereszczynski Biophysical Journal 122 (3), 496a, 2023 | | 2023 |
| Coordinated Motion of Dimeric Interfaces in Eukaryotic Type IIA Topoisomerases NL Kariyawasam, JL Nitiss, JM Wereszczynski Biophysical Journal 120 (3), 137a, 2021 | | 2021 |
| Simulation study of non-conserved mutations in the lac repressor protein NK Manachchige, L Swint-Kruse, P Smith ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019 | | 2019 |
| Residue based contributions to the thermodynamic properties of ubiquitin NK Manachchige, E Ploetz, P Smith ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 255, 2018 | | 2018 |
| Peptide-based nanosponges S Bossmann, H Wang, A Yapa, S Wendel, N Kariyawasam, T Shrestha, ... ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 253, 2017 | | 2017 |
| Kirkwood-Buff-derived force field for polyols NK Manachchige, P Smith ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 251, 2016 | | 2016 |
