Efficient and exact sampling of simple graphs with given arbitrary degree sequence CI Del Genio, H Kim, Z Toroczkai, KE Bassler PloS one 5 (4), e10012, 2010 | 190 | 2010 |
Measuring causal specificity PE Griffiths, A Pocheville, B Calcott, K Stotz, H Kim, R Knight Philosophy of science 82 (4), 529-555, 2015 | 124 | 2015 |
Criticality distinguishes the ensemble of biological regulatory networks BC Daniels, H Kim, D Moore, S Zhou, HB Smith, B Karas, SA Kauffman, ... Physical review letters 121 (13), 138102, 2018 | 113 | 2018 |
Degree-based graph construction H Kim, Z Toroczkai, PL Erdős, I Miklós, LA Székely Journal of Physics A: Mathematical and Theoretical 42 (39), 392001, 2009 | 97 | 2009 |
Constructing and sampling directed graphs with given degree sequences H Kim, CI Del Genio, KE Bassler, Z Toroczkai New Journal of Physics 14 (2), 023012, 2012 | 90 | 2012 |
The informational architecture of the cell SI Walker, H Kim, PCW Davies Philosophical Transactions of the Royal Society A: Mathematical, Physical …, 2016 | 88 | 2016 |
How causal analysis can reveal autonomy in models of biological systems W Marshall, H Kim, SI Walker, G Tononi, L Albantakis Philosophical transactions of the Royal Society a: Mathematical, physical …, 2017 | 76 | 2017 |
Signaling hypergraphs A Ritz, AN Tegge, H Kim, CL Poirel, TM Murali Trends in biotechnology 32 (7), 356-362, 2014 | 64 | 2014 |
Universal scaling across biochemical networks on Earth H Kim, HB Smith, C Mathis, J Raymond, SI Walker Science advances 5 (1), eaau0149, 2019 | 53 | 2019 |
New scaling relation for information transfer in biological networks H Kim, P Davies, SI Walker Journal of The Royal Society Interface 12 (113), 20150944, 2015 | 38 | 2015 |
Contact Tracing: a game of big numbers in the time of COVID-19 H Kim, A Paul MedRxiv, 2020 | 26* | 2020 |
On realizing all simple graphs with a given degree sequence H Kim, Z Toroczkai, I Miklós, P Erdos, L Székely Discrete Mathematics, 2008 | 22 | 2008 |
Beyond COVID-19: network science and sustainable exit strategies J Bell, G Bianconi, D Butler, J Crowcroft, PCW Davies, C Hicks, H Kim, ... Journal of Physics: Complexity 2 (2), 021001, 2021 | 19 | 2021 |
Scaling laws in enzyme function reveal a new kind of biochemical universality DC Gagler, B Karas, CP Kempes, J Malloy, V Mierzejewski, AD Goldman, ... Proceedings of the National Academy of Sciences 119 (9), e2106655119, 2022 | 17 | 2022 |
Scarcity of scale-free topology is universal across biochemical networks HB Smith, H Kim, SI Walker Scientific reports 11 (1), 6542, 2021 | 13 | 2021 |
Biological networks across scales—the theoretical and empirical foundations for time-varying complex networks that connect structure and function across levels of biological … P Bogdan, G Caetano-Anollés, A Jolles, H Kim, J Morris, CA Murphy, ... Integrative and comparative biology 61 (6), 1991-2010, 2021 | 11 | 2021 |
Informational architecture across non-living and living collectives H Kim, G Valentini, J Hanson, SI Walker Theory in Biosciences, 1-17, 2021 | 8 | 2021 |
Inferring exoplanet disequilibria with multivariate information in atmospheric reaction networks T Fisher, H Kim, C Millsaps, M Line, SI Walker The Astronomical Journal 164 (2), 53, 2022 | 7 | 2022 |
Logic and connectivity jointly determine criticality in biological gene regulatory networks BC Daniels, H Kim, D Moore, S Zhou, H Smith, B Karas, SA Kauffman, ... arXiv preprint arXiv:1805.01447, 2018 | 6 | 2018 |
Unstable communities in network ensembles A Rahman, STK Jan, H Kim, BA Prakash, TM Murali Proceedings of the 2016 SIAM International Conference on Data Mining, 504-512, 2016 | 2 | 2016 |