Blue Gene: A vision for protein science using a petaflop supercomputer F Allen, G Almasi, W Andreoni, D Beece, BJ Berne, A Bright, J Brunheroto, ... IBM systems journal 40 (2), 310-327, 2001 | 353 | 2001 |
A role for direct interactions in the modulation of rhodopsin by ω-3 polyunsaturated lipids A Grossfield, SE Feller, MC Pitman Proceedings of the National Academy of Sciences 103 (13), 4888-4893, 2006 | 331 | 2006 |
System for selling a product utilizing audio content identification MC Pitman, BG Fitch, S Abrams, RS Germain US Patent 6,748,360, 2004 | 250 | 2004 |
A lipid pathway for ligand binding is necessary for a cannabinoid G protein-coupled receptor DP Hurst, A Grossfield, DL Lynch, S Feller, TD Romo, K Gawrisch, ... Journal of Biological Chemistry 285 (23), 17954-17964, 2010 | 235 | 2010 |
Dynamics of confined reactive water in smectite clay–zeolite composites MC Pitman, ACT Van Duin Journal of the American Chemical Society 134 (6), 3042-3053, 2012 | 222 | 2012 |
Molecular-level organization of saturated and polyunsaturated fatty acids in a phosphatidylcholine bilayer containing cholesterol MC Pitman, F Suits, AD MacKerell, SE Feller Biochemistry 43 (49), 15318-15328, 2004 | 216 | 2004 |
System for monitoring broadcast audio content MC Pitman, BG Fitch, S Abrams, RS Germain US Patent 6,574,594, 2003 | 209 | 2003 |
Convergence of molecular dynamics simulations of membrane proteins A Grossfield, SE Feller, MC Pitman Proteins: structure, function, and bioinformatics 67 (1), 31-40, 2007 | 206 | 2007 |
System for monitoring audio content in a video broadcast MC Pitman, BG Fitch, S Abrams, RS Germain US Patent 7,085,613, 2006 | 173 | 2006 |
Internal hydration increases during activation of the G-protein-coupled receptor rhodopsin A Grossfield, MC Pitman, SE Feller, O Soubias, K Gawrisch Journal of molecular biology 381 (2), 478-486, 2008 | 162 | 2008 |
Role of cholesterol and polyunsaturated chains in lipid− protein interactions: molecular dynamics simulation of rhodopsin in a realistic membrane environment MC Pitman, A Grossfield, F Suits, SE Feller Journal of the American Chemical Society 127 (13), 4576-4577, 2005 | 154 | 2005 |
Structural and dynamic effects of cholesterol at preferred sites of interaction with rhodopsin identified from microsecond length molecular dynamics simulations G Khelashvili, A Grossfield, SE Feller, M Pitman, H Weinstein Biophysical Journal 96 (3), 678a, 2009 | 127 | 2009 |
Retinal counterion switch mechanism in vision evaluated by molecular simulations K Martínez-Mayorga, MC Pitman, A Grossfield, SE Feller, MF Brown Journal of the American Chemical Society 128 (51), 16502-16503, 2006 | 97 | 2006 |
Blue Matter, an application framework for molecular simulation on Blue Gene BG Fitch, RS Germain, M Mendell, J Pitera, M Pitman, A Rayshubskiy, ... Journal of Parallel and Distributed Computing 63 (7-8), 759-773, 2003 | 92 | 2003 |
Blue matter: Approaching the limits of concurrency for classical molecular dynamics BG Fitch, A Rayshubskiy, M Eleftheriou, TJC Ward, M Giampapa, ... Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, 87-es, 2006 | 88 | 2006 |
Concerted interconversion between ionic lock substates of the β2 adrenergic receptor revealed by microsecond timescale molecular dynamics TD Romo, A Grossfield, MC Pitman Biophysical Journal 98 (1), 76-84, 2010 | 87 | 2010 |
Feature-based audio content identification MC Pitman, BG Fitch, S Abrams, RS Germain US Patent 6,604,072, 2003 | 85 | 2003 |
Blue Matter: Strong scaling of molecular dynamics on Blue Gene/L BG Fitch, A Rayshubskiy, M Eleftheriou, TJC Ward, M Giampapa, ... Computational Science–ICCS 2006: 6th International Conference, Reading, UK …, 2006 | 74 | 2006 |
System for monitoring audio content available over a network MC Pitman, BG Fitch, S Abrams, RS Germain US Patent 7,031,921, 2006 | 65 | 2006 |
Dynamic structure of retinylidene ligand of rhodopsin probed by molecular simulations PW Lau, A Grossfield, SE Feller, MC Pitman, MF Brown Journal of molecular biology 372 (4), 906-917, 2007 | 54 | 2007 |