CPPsite 2.0: a repository of experimentally validated cell-penetrating peptides P Agrawal, S Bhalla, SS Usmani, S Singh, K Chaudhary, GPS Raghava, ... Nucleic acids research 44 (D1), D1098-D1103, 2016 | 295 | 2016 |
AntiCP 2.0: an updated model for predicting anticancer peptides P Agrawal, D Bhagat, M Mahalwal, N Sharma, GPS Raghava Briefings in Bioinformatics, 2020 | 192 | 2020 |
SATPdb: a database of structurally annotated therapeutic peptides S Singh, K Chaudhary, SK Dhanda, S Bhalla, SS Usmani, A Gautam, ... Nucleic acids research 44 (D1), D1119-D1126, 2016 | 181 | 2016 |
PEPlife: a repository of the half-life of peptides D Mathur, S Prakash, P Anand, H Kaur, P Agrawal, A Mehta, R Kumar, ... Scientific reports 6 (1), 36617, 2016 | 149 | 2016 |
Benchmarking of different molecular docking methods for protein-peptide docking P Agrawal, H Singh, HK Srivastava, S Singh, G Kishore, GPS Raghava BMC bioinformatics 19, 105-124, 2019 | 143 | 2019 |
In Silico Approach for Prediction of Antifungal Peptides P Agrawal, S Bhalla, K Chaudhary, R Kumar, M Sharma, GPS Raghava Frontiers in microbiology 9, 323, 2018 | 131 | 2018 |
Novel in silico tools for designing peptide-based subunit vaccines and immunotherapeutics SK Dhanda, SS Usmani, P Agrawal, G Nagpal, A Gautam, GPS Raghava Briefings in bioinformatics 18 (3), 467-478, 2017 | 115 | 2017 |
HumCFS: a database of fragile sites in human chromosomes R Kumar, G Nagpal, V Kumar, SS Usmani, P Agrawal, GPS Raghava BMC genomics 19, 1-8, 2019 | 83 | 2019 |
In silico approaches for predicting the half-life of natural and modified peptides in blood D Mathur, S Singh, A Mehta, P Agrawal, GPS Raghava PloS one 13 (6), e0196829, 2018 | 81 | 2018 |
Computer-aided prediction of antigen presenting cell modulators for designing peptide-based vaccine adjuvants G Nagpal, K Chaudhary, P Agrawal, GPS Raghava Journal of translational medicine 16, 1-15, 2018 | 69 | 2018 |
Prediction of cell-penetrating potential of modified peptides containing natural and chemically modified residues V Kumar, P Agrawal, R Kumar, S Bhalla, SS Usmani, GC Varshney, ... Frontiers in microbiology 9, 725, 2018 | 57 | 2018 |
Computing wide range of protein/peptide features from their sequence and structure RGPS Pande A, Patiyal S, Lathwal A, Arora C, Kaur D, Dhall A, Mishra G, Kaur ... BioRxiv, 2019 | 51 | 2019 |
Multiple Myeloma DREAM Challenge reveals epigenetic regulator PHF19 as marker of aggressive disease MJ Mason, C Schinke, CLP Eng, F Towfic, F Gruber, A Dervan, BS White, ... Leukemia 34 (7), 1866-1874, 2020 | 41 | 2020 |
NeuroPIpred: a tool to predict, design and scan insect neuropeptides P Agrawal, S Kumar, A Singh, GPS Raghava, IK Singh Scientific Reports 9 (1), 5129, 2019 | 41 | 2019 |
Prediction of antimicrobial potential of a chemically modified peptide from its tertiary structure P Agrawal, GPS Raghava Frontiers in Microbiology 9, 2551, 2018 | 41 | 2018 |
A web-based platform on coronavirus disease-19 to maintain predicted diagnostic, drug, and vaccine candidates S Patiyal, D Kaur, H Kaur, N Sharma, A Dhall, S Sahai, P Agrawal, ... Monoclonal Antibodies in Immunodiagnosis and Immunotherapy 39 (6), 204-216, 2020 | 29 | 2020 |
A method for predicting hemolytic potency of chemically modified peptides from its structure V Kumar, R Kumar, P Agrawal, S Patiyal, GPS Raghava Frontiers in pharmacology 11, 54, 2020 | 28 | 2020 |
NAGbinder: An approach for identifying N‐acetylglucosamine interacting residues of a protein from its primary sequence S Patiyal, P Agrawal, V Kumar, A Dhall, R Kumar, G Mishra, ... Protein Science 29 (1), 201-210, 2020 | 26 | 2020 |
Community assessment of the predictability of cancer protein and phosphoprotein levels from genomics and transcriptomics M Yang, F Petralia, Z Li, H Li, W Ma, X Song, S Kim, H Lee, H Yu, B Lee, ... Cell systems 11 (2), 186-195. e9, 2020 | 24 | 2020 |
Pfeature: A tool for computing wide range of protein features and building prediction models A Pande, S Patiyal, A Lathwal, C Arora, D Kaur, A Dhall, G Mishra, H Kaur, ... Journal of Computational Biology 30 (2), 204-222, 2023 | 23 | 2023 |