| Targeting tumor-associated macrophages and granulocytic myeloid-derived suppressor cells augments PD-1 blockade in cholangiocarcinoma E Loeuillard, J Yang, ELN Buckarma, J Wang, Y Liu, C Conboy, ... The Journal of clinical investigation 130 (10), 5380-5396, 2020 | 224 | 2020 |
| Global mapping of H3K4me3 and H3K27me3 reveals chromatin state-based regulation of human monocyte-derived dendritic cells in different environments Y Huang, S Min, Y Lui, J Sun, X Su, Y Liu, Y Zhang, D Han, Y Che, ... Genes & Immunity 13 (4), 311-320, 2012 | 56 | 2012 |
| Bioinformatics and DNA-extraction strategies to reliably detect genetic variants from FFPE breast tissue samples AV Bhagwate, Y Liu, SJ Winham, SJ McDonough, ML Stallings-Mann, ... BMC genomics 20, 1-10, 2019 | 55 | 2019 |
| Gene expression differences between matched pairs of ovarian cancer patient tumors and patient-derived xenografts Y Liu, P Chanana, JI Davila, X Hou, V Zanfagnin, CD McGehee, ... Scientific reports 9 (1), 6314, 2019 | 41 | 2019 |
| Outcomes of TP53 mutated AML with evolving frontline therapies: impact of allogeneic stem cell transplantation on survival MD Patel, Y Abaza, JP Bewersdorf, AN Saliba, GSDC Correia, A Duvall, ... | 29 | 2022 |
| Ex Vivo Hepatocyte Reprograming Promotes Homology‐Directed DNA Repair to Correct Metabolic Disease in Mice After Transplantation CJ VanLith, RM Guthman, CT Nicolas, KL Allen, Y Liu, JA Chilton, ZP Tritz, ... Hepatology Communications 3 (4), 558-573, 2019 | 27 | 2019 |
| A combined gene expression and functional study reveals the crosstalk between N-Myc and differentiation-inducing microRNAs in neuroblastoma cells Z Zhao, X Ma, SD Shelton, DC Sung, M Li, D Hernandez, M Zhang, ... Oncotarget 7 (48), 79372, 2016 | 24 | 2016 |
| Adenosine A2A receptor blockade prevents cisplatin-induced impairments in neurogenesis and cognitive function A Oliveros, KH Yoo, MA Rashid, A Corujo-Ramirez, B Hur, J Sung, Y Liu, ... Proceedings of the National Academy of Sciences 119 (28), e2206415119, 2022 | 18 | 2022 |
| Molecular and immunohistochemical analysis of mucinous cystic neoplasm of the liver BJ Van Treeck, M Lotfalla, TW Czeczok, T Mounajjed, RK Moreira, ... American journal of clinical pathology 154 (6), 837-847, 2020 | 18 | 2020 |
| Dendritic cell-associated miRNAs are modulated via chromatin remodeling in response to different environments S Mei, Y Liu, Y Bao, Y Zhang, S Min, Y Liu, Y Huang, X Yuan, Y Feng, ... PLoS One 9 (4), e90231, 2014 | 18 | 2014 |
| Differential expression analysis of RNA sequencing data by incorporating non-exonic mapped reads HIH Chen, Y Liu, Y Zou, Z Lai, D Sarkar, Y Huang, Y Chen BMC genomics 16, 1-13, 2015 | 17 | 2015 |
| Concomitant Erdheim‐Chester disease and chronic myelomonocytic leukaemia: genomic insights into a common clonal origin. G Goyal, Y Liu, A Ravindran, A Al‐Kali, RS Go, MM Patnaik, KL Rech British journal of haematology 187 (2), 2019 | 15 | 2019 |
| Bone marrow findings in Erdheim-Chester disease: increased prevalence of chronic myeloid neoplasms G Goyal, A Ravindran, Y Liu, R He, MV Shah, NN Bennani, MM Patnaik, ... Haematologica 105 (2), e84, 2020 | 13 | 2020 |
| Renal artery stenosis alters gene expression in swine scattered tubular-like cells A Aghajani Nargesi, XY Zhu, Y Liu, H Tang, KL Jordan, LO Lerman, ... International journal of molecular sciences 20 (20), 5069, 2019 | 13 | 2019 |
| XBSeq2: a fast and accurate quantification of differential expression and differential polyadenylation Y Liu, P Wu, J Zhou, TL Johnson-Pais, Z Lai, WH Chowdhury, ... BMC bioinformatics 18, 57-65, 2017 | 12 | 2017 |
| Quality control recommendations for RNASeq using FFPE samples based on pre-sequencing lab metrics and post-sequencing bioinformatics metrics Y Liu, A Bhagwate, SJ Winham, MT Stephens, BW Harker, ... BMC medical genomics 15 (1), 195, 2022 | 11 | 2022 |
| Semi-supervised topological analysis for elucidating hidden structures in high-dimensional transcriptome datasets T Feng, JI Davila, Y Liu, S Lin, S Huang, C Wang IEEE/ACM transactions on computational biology and bioinformatics 18 (4 …, 2019 | 7 | 2019 |
| A microRNA transcriptome-wide association study of prostate cancer risk NB Larson, SK McDonnell, Z Fogarty, Y Liu, AJ French, LS Tillmans, ... Frontiers in Genetics 13, 836841, 2022 | 6 | 2022 |
| Determining mutational burden and signature using RNA-seq from tumor-only samples E Jessen, Y Liu, J Davila, JP Kocher, C Wang BMC medical genomics 14, 1-9, 2021 | 6 | 2021 |
| Differentially Expressed Functional LncRNAs in human subjects with metabolic syndrome reflect a competing endogenous RNA network in circulating extracellular vesicles Y Li, Y Meng, Y Liu, AJ Van Wijnen, A Eirin, LO Lerman Frontiers in molecular biosciences 8, 667056, 2021 | 6 | 2021 |
