Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum SC Bendall, EF Simonds, P Qiu, ED Amir, PO Krutzik, R Finck, ... Science 332 (6030), 687, 2011 | 2437 | 2011 |
Genome Sequence of Aedes aegypti, a Major Arbovirus Vector V Nene, JR Wortman, D Lawson, B Haas, C Kodira, Z Tu, B Loftus, Z Xi, ... Science 316 (5832), 1718-1723, 2007 | 1350 | 2007 |
Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE P Qiu, EF Simonds, SC Bendall, KD Gibbs Jr, RV Bruggner, ... Nature biotechnology 29 (10), 886-891, 2011 | 1050 | 2011 |
Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators B Bodenmiller, ER Zunder, R Finck, TJ Chen, ES Savig, RV Bruggner, ... Nature Biotechnology, 2012 | 586 | 2012 |
Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle EF Kirkness, BJ Haas, W Sun, HR Braig, MA Perotti, JM Clark, SH Lee, ... Proceedings of the National Academy of Sciences 107 (27), 12168-12173, 2010 | 572 | 2010 |
Automated identification of stratifying signatures in cellular subpopulations RV Bruggner, B Bodenmiller, DL Dill, RJ Tibshirani, GP Nolan Proceedings of the National Academy of Sciences 111 (26), E2770-E2777, 2014 | 474 | 2014 |
Clinical recovery from surgery correlates with single-cell immune signatures B Gaudillière, GK Fragiadakis, RV Bruggner, M Nicolau, R Finck, M Tingle, ... Science translational medicine 6 (255), 255ra131-255ra131, 2014 | 320 | 2014 |
VectorBase: a data resource for invertebrate vector genomics D Lawson, P Arensburger, P Atkinson, NJ Besansky, RV Bruggner, ... Nucleic acids research 37 (suppl_1), D583-D587, 2009 | 268 | 2009 |
Update of the Anopheles gambiaePEST genome assembly MV Sharakhova, MP Hammond, NF Lobo, J Krzywinski, MF Unger, ... Genome biology 8, 1-13, 2007 | 152 | 2007 |
VectorBase: a home for invertebrate vectors of human pathogens D Lawson, P Arensburger, P Atkinson, NJ Besansky, RV Bruggner, ... Nucleic acids research 35 (suppl_1), D503-D505, 2007 | 148 | 2007 |
CytoSPADE: high-performance analysis and visualization of high-dimensional cytometry data MD Linderman, Z Bjornson, EF Simonds, P Qiu, RV Bruggner, K Sheode, ... Bioinformatics 28 (18), 2400-2401, 2012 | 39 | 2012 |
Anatomical ontologies of mosquitoes and ticks, and their web browsers in VectorBase P Topalis, C Tzavlaki, K Vestaki, E Dialynas, DE Sonenshine, R Butler, ... Insect molecular biology 17 (1), 87-89, 2008 | 30 | 2008 |
Genomic resources for invertebrate vectors of human pathogens, and the role of VectorBase K Megy, M Hammond, D Lawson, RV Bruggner, E Birney, FH Collins Infection, Genetics and Evolution 9 (3), 308-313, 2009 | 23 | 2009 |
Identification of novel LNK mutations in patients with chronic myeloproliferative neoplasms and related disorders ST Oh, JM Zahn, CD Jones, B Zhang, ML Loh, H Kantarjian, EF Simonds, ... Blood 116 (21), 315, 2010 | 22 | 2010 |
GateFinder: projection-based gating strategy optimization for flow and mass cytometry N Aghaeepour, EF Simonds, DJHF Knapp, RV Bruggner, K Sachs, ... Bioinformatics 34 (23), 4131-4133, 2018 | 21 | 2018 |
High-throughput Bayesian network learning using heterogeneous multicore computers MD Linderman, R Bruggner, V Athalye, TH Meng, N Bani Asadi, GP Nolan Proceedings of the 24th ACM International Conference on Supercomputing, 95-104, 2010 | 21 | 2010 |
Transcription Profiling Associated With Life Cycle of Anopheles gambiae BW Harker, YS Hong, C Sim, AN Dana, RV Bruggner, NF Lobo, MK Kern, ... Journal of medical entomology 49 (2), 316-325, 2012 | 12 | 2012 |
Coordinated surgical immune signatures contain correlates of clinical recovery B Gaudilliere, GK Fragiadakis, RV Bruggner, M Nicolau, R Finck, M Tingle, ... Science translational medicine 6 (255), 255ra131, 2014 | 7 | 2014 |
A Framework for Meta-Analysis of Cytometry Data C Jujjavarapu, J Hughey, F Gherardini, R Bruggner, G Nolan, ... The Journal of Immunology 196 (1_Supplement), 69.16-69.16, 2016 | 1 | 2016 |
VectorBase: a data resource for invertebrate vector genomics CA Hill, C Louis, D Lawson, D Severson, E Dialynas, EO Stinson, ... University of Notre Dame, 2015 | | 2015 |