| Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes LA McCue, W Thompson, CS Carmack, MP Ryan, JS Liu, V Derbyshire, ... Nucleic acids research 29 (3), 774-782, 2001 | 342 | 2001 |
| mirWIP: microRNA target prediction based on microRNA-containing ribonucleoprotein–enriched transcripts M Hammell, D Long, L Zhang, A Lee, CS Carmack, M Han, Y Ding, ... Nature methods 5 (9), 813-819, 2008 | 260 | 2008 |
| Brain-computer interface (BCI) evaluation in people with amyotrophic lateral sclerosis LM McCane, EW Sellers, DJ McFarland, JN Mak, CS Carmack, D Zeitlin, ... Amyotrophic lateral sclerosis and frontotemporal degeneration 15 (3-4), 207-215, 2014 | 148 | 2014 |
| Independent home use of a brain-computer interface by people with amyotrophic lateral sclerosis JR Wolpaw, RS Bedlack, DJ Reda, RJ Ringer, PG Banks, TM Vaughan, ... Neurology 91 (3), e258-e267, 2018 | 143 | 2018 |
| Factors influencing the identification of transcription factor binding sites by cross-species comparison LA McCue, W Thompson, CS Carmack, CE Lawrence Genome research 12 (10), 1523-1532, 2002 | 137 | 2002 |
| A structural interpretation of the effect of GC-content on efficiency of RNA interference CY Chan, CS Carmack, DD Long, A Maliyekkel, Y Shao, IB Roninson, ... BMC bioinformatics 10, 1-7, 2009 | 118 | 2009 |
| STarMir: a web server for prediction of microRNA binding sites W Rennie, C Liu, CS Carmack, A Wolenc, S Kanoria, J Lu, D Long, Y Ding Nucleic acids research 42 (W1), W114-W118, 2014 | 114 | 2014 |
| CLIP-based prediction of mammalian microRNA binding sites C Liu, B Mallick, D Long, WA Rennie, A Wolenc, CS Carmack, Y Ding Nucleic acids research 41 (14), e138-e138, 2013 | 113 | 2013 |
| Tumor-specific silencing of COPZ2 gene encoding coatomer protein complex subunit ζ2 renders tumor cells dependent on its paralogous gene COPZ1 M Shtutman, M Baig, E Levina, G Hurteau, C Lim, E Broude, M Nikiforov, ... Proceedings of the National Academy of Sciences 108 (30), 12449-12454, 2011 | 83 | 2011 |
| Identification of bacterial sRNA regulatory targets using ribosome profiling J Wang, W Rennie, C Liu, CS Carmack, K Prévost, MP Caron, E Massé, ... Nucleic acids research 43 (21), 10308-10320, 2015 | 79 | 2015 |
| Effects of genetic variations on microRNA: target interactions C Liu, WA Rennie, CS Carmack, S Kanoria, J Cheng, J Lu, Y Ding Nucleic acids research 42 (15), 9543-9552, 2014 | 57 | 2014 |
| STarMirDB: A database of microRNA binding sites W Rennie, S Kanoria, C Liu, B Mallick, D Long, A Wolenc, CS Carmack, ... RNA biology 13 (6), 554-560, 2016 | 53 | 2016 |
| PhyloScan: identification of transcription factor binding sites using cross-species evidence CS Carmack, LA McCue, LA Newberg, CE Lawrence Algorithms for Molecular Biology 2, 1-17, 2007 | 45 | 2007 |
| STarMir tools for prediction of microRNA binding sites S Kanoria, W Rennie, C Liu, CS Carmack, J Lu, Y Ding RNA Structure Determination: Methods and Protocols, 73-82, 2016 | 40 | 2016 |
| Radiation from the channeling of 10-GeV positrons by silicon single crystals NA Filatova, VM Golovatyuk, AN Iskakov, IM Ivanchenko, RB Kadyrov, ... Physical Review Letters 48 (7), 488, 1982 | 34 | 1982 |
| Function-based gene identification using enzymatically generated normalized shRNA library and massive parallel sequencing M Shtutman, A Maliyekkel, Y Shao, CS Carmack, M Baig, N Warholic, ... Proceedings of the National Academy of Sciences 107 (16), 7377-7382, 2010 | 24 | 2010 |
| Identification of novel genes that regulate androgen receptor signaling and growth of androgen-deprived prostate cancer cells E Levina, H Ji, M Chen, M Baig, D Oliver, P Ohouo, C Lim, G Schools, ... Oncotarget 6 (15), 13088, 2015 | 22 | 2015 |
| MicroRNA binding sites in C. elegans 3′ UTRs C Liu, WA Rennie, B Mallick, S Kanoria, D Long, A Wolenc, CS Carmack, ... RNA biology 11 (6), 693-701, 2014 | 15 | 2014 |
| Sfold tools for MicroRNA target prediction W Rennie, S Kanoria, C Liu, CS Carmack, J Lu, Y Ding MicroRNA Target Identification: Methods and Protocols, 31-42, 2019 | 9 | 2019 |
| Eeg-based brain-computer interface access to tobii dynavox communicator 5 KA Gosmanova, CS Carmack, D Goldberg, K Fitzpatrick, B Zoltan, ... Rehabilitation Engineering and AssistiveTechnology Society of North America 4, 2017 | 7 | 2017 |
