RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures Z Miao, RW Adamiak, MF Blanchet, M Boniecki, JM Bujnicki, SJ Chen, ... Rna 21 (6), 1066-1084, 2015 | 185 | 2015 |
The African swine fever virus transcriptome G Cackett, D Matelska, M Sýkora, R Portugal, M Malecki, J Bähler, ... Journal of Virology 94 (9), 2020 | 142 | 2020 |
Comprehensive classification of the PIN domain-like superfamily D Matelska, K Steczkiewicz, K Ginalski Nucleic acids research 45 (12), 6995-7020, 2017 | 88 | 2017 |
Influences of rare protein-coding genetic variants on the human plasma proteome in 50,829 UK Biobank participants RS Dhindsa, OS Burren, BB Sun, BP Prins, D Matelska, E Wheeler, ... bioRxiv, 2022 | 81* | 2022 |
Comparative genomic analysis of Staphylococcus lugdunensis shows a closed pan-genome and multiple barriers to horizontal gene transfer X Argemi, D Matelska, K Ginalski, P Riegel, Y Hansmann, J Bloom, ... BMC genomics 19 (1), 621, 2018 | 57 | 2018 |
African Swine Fever Virus and Host Response: Transcriptome Profiling of the Georgia 2007/1 Strain and Porcine Macrophages G Cackett, R Portugal, D Matelska, L Dixon, F Werner Journal of virology 96 (5), e01939-21, 2022 | 50 | 2022 |
Computational modeling of RNA 3D structures, with the aid of experimental restraints M Magnus, D Matelska, G Łach, G Chojnowski, MJ Boniecki, E Purta, ... RNA biology 11 (5), 522-536, 2014 | 48 | 2014 |
An RNAi screen identifies KIF15 as a novel regulator of the endocytic trafficking of integrin A Eskova, B Knapp, D Matelska, S Reusing, A Arjonen, T Lisauskas, ... Journal of cell science 127 (11), 2433-2447, 2014 | 44 | 2014 |
Key concepts and challenges in archaeal transcription F Blombach, D Matelska, T Fouqueau, G Cackett, F Werner Journal of molecular biology 431 (20), 4184-4201, 2019 | 40 | 2019 |
The cutting edge of archaeal transcription T Fouqueau, F Blombach, G Cackett, AE Carty, DM Matelska, S Ofer, ... Emerging Topics in Life Sciences 2 (4), 517-533, 2018 | 38 | 2018 |
Rare variant associations with plasma protein levels in the UK Biobank RS Dhindsa, OS Burren, BB Sun, BP Prins, D Matelska, E Wheeler, ... Nature 622 (7982), 339-347, 2023 | 35 | 2023 |
Computational modeling of protein–RNA complex structures I Tuszynska, D Matelska, M Magnus, G Chojnowski, JM Kasprzak, ... Methods 65 (3), 310-319, 2014 | 31 | 2014 |
Systematic classification of the His-Me finger superfamily J Jablonska, D Matelska, K Steczkiewicz, K Ginalski Nucleic acids research 45 (20), 11479-11494, 2017 | 30 | 2017 |
Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase D Matelska, IG Shabalin, J Jabłońska, MJ Domagalski, J Kutner, ... BMC evolutionary biology 18 (1), 199, 2018 | 21 | 2018 |
S6: S18 ribosomal protein complex interacts with a structural motif present in its own mRNA D Matelska, E Purta, S Panek, MJ Boniecki, JM Bujnicki, ... RNA 19 (10), 1341-1348, 2013 | 21 | 2013 |
Promoter-proximal elongation regulates transcription in archaea F Blombach, T Fouqueau, D Matelska, K Smollett, F Werner Nature Communications 12 (1), 1-15, 2021 | 19 | 2021 |
Structural, biochemical, and evolutionary characterizations of glyoxylate/hydroxypyruvate reductases show their division into two distinct subfamilies J Kutner, IG Shabalin, D Matelska, KB Handing, O Gasiorowska, P Sroka, ... Biochemistry 57 (6), 963-977, 2018 | 15 | 2018 |
Loss of conserved noncoding RNAs in genomes of bacterial endosymbionts D Matelska, M Kurkowska, E Purta, JM Bujnicki, S Dunin-Horkawicz Genome biology and evolution 8 (2), 426-438, 2016 | 15 | 2016 |
DNA-bridging by an archaeal histone variant via a unique tetramerisation interface S Ofer, F Blombach, AM Erkelens, D Barker, Z Soloviev, S Schwab, ... Communications Biology 6 (1), 968, 2023 | 13 | 2023 |
SupeRNAlign: a new tool for flexible superposition of homologous RNA structures and inference of accurate structure-based sequence alignments P Piątkowski, J Jabłońska, A Żyła, D Niedziałek, D Matelska, ... Nucleic acids research 45 (16), e150-e150, 2017 | 12 | 2017 |