Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa R Viana, S Moyo, DG Amoako, H Tegally, C Scheepers, CL Althaus, ... Nature 603 (7902), 679-686, 2022 | 1476 | 2022 |
Early assessment of the clinical severity of the SARS-CoV-2 omicron variant in South Africa: a data linkage study N Wolter, W Jassat, S Walaza, R Welch, H Moultrie, M Groome, ... The Lancet 399 (10323), 437-446, 2022 | 1061 | 2022 |
Omicron extensively but incompletely escapes Pfizer BNT162b2 neutralization S Cele, L Jackson, DS Khoury, K Khan, T Moyo-Gwete, H Tegally, JE San, ... Nature 602 (7898), 654-656, 2022 | 1044 | 2022 |
Emergence of SARS-CoV-2 omicron lineages BA. 4 and BA. 5 in South Africa H Tegally, M Moir, J Everatt, M Giovanetti, C Scheepers, E Wilkinson, ... Nature medicine 28 (9), 1785-1790, 2022 | 548 | 2022 |
SARS-CoV-2 Omicron has extensive but incomplete escape of Pfizer BNT162b2 elicited neutralization and requires ACE2 for infection S Cele, L Jackson, DS Khoury, K Khan, T Moyo-Gwete, H Tegally, JE San, ... MedRxiv, 2021 | 365 | 2021 |
A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa E Wilkinson, M Giovanetti, H Tegally, JE San, R Lessells, D Cuadros, ... Science 374 (6566), 423-431, 2021 | 195 | 2021 |
Omicron BA. 4/BA. 5 escape neutralizing immunity elicited by BA. 1 infection K Khan, F Karim, Y Ganga, M Bernstein, Z Jule, K Reedoy, S Cele, ... Nature communications 13 (1), 4686, 2022 | 148 | 2022 |
Carbonyl cyanide m-chlorophenylhydrazine (CCCP) reverses resistance to colistin, but not to carbapenems and tigecycline in multidrug-resistant Enterobacteriaceae J Osei Sekyere, DG Amoako Frontiers in microbiology 8, 228, 2017 | 122 | 2017 |
Continued emergence and evolution of Omicron in South Africa: New BA. 4 and BA. 5 lineages H Tegally, M Moir, J Everatt, M Giovanetti, C Scheepers, E Wilkinson, ... MedRxiv, 2022.05. 01.22274406, 2022 | 110 | 2022 |
The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance H Tegally, JE San, M Cotten, M Moir, B Tegomoh, G Mboowa, DP Martin, ... Science 378 (6615), eabq5358, 2022 | 96 | 2022 |
Diversity and proliferation of metallo-β-lactamases: a clarion call for clinically effective metallo-β-lactamase inhibitors AM Somboro, J Osei Sekyere, DG Amoako, SY Essack, LA Bester Applied and Environmental Microbiology 84 (18), e00698-18, 2018 | 83 | 2018 |
Omicron sub-lineages BA. 4/BA. 5 escape BA. 1 infection elicited neutralizing immunity K Khan, F Karim, Y Ganga, M Bernstein, Z Jule, K Reedoy, S Cele, ... MedRxiv, 2022.04. 29.22274477, 2022 | 81 | 2022 |
Kosakovsky Pond SL R Viana, S Moyo, DG Amoako, H Tegally, C Scheepers, CL Althaus, ... Kraemer MUG, Kuate-Lere L, Laguda-Akingba O, Lesetedi-Mafoko O, Lessells RJ …, 2022 | 80 | 2022 |
Clinical severity of SARS-CoV-2 Omicron BA. 4 and BA. 5 lineages compared to BA. 1 and Delta in South Africa N Wolter, W Jassat, S Walaza, R Welch, H Moultrie, MJ Groome, ... Nature communications 13 (1), 5860, 2022 | 79 | 2022 |
Genomic and phenotypic characterisation of fluoroquinolone resistance mechanisms in Enterobacteriaceae in Durban, South Africa J Osei Sekyere, DG Amoako PLoS One 12 (6), e0178888, 2017 | 75 | 2017 |
Omicron infection enhances Delta antibody immunity in vaccinated persons K Khan, F Karim, S Cele, K Reedoy, JE San, G Lustig, H Tegally, ... Nature 607 (7918), 356-359, 2022 | 73 | 2022 |
Selection analysis identifies clusters of unusual mutational changes in Omicron lineage BA. 1 that likely impact Spike function DP Martin, S Lytras, AG Lucaci, W Maier, B Grüning, SD Shank, S Weaver, ... Molecular biology and evolution 39 (4), msac061, 2022 | 72 | 2022 |
Antibiotic resistance in food animals in Africa: a systematic review and meta-analysis LL Founou, DG Amoako, RC Founou, SY Essack Microbial Drug Resistance 24 (5), 648-665, 2018 | 59 | 2018 |
Molecular epidemiology of antibiotic-resistant Enterococcus spp. from the farm-to-fork continuum in intensive poultry production in KwaZulu-Natal, South Africa C Molechan, DG Amoako, ALK Abia, AM Somboro, LA Bester, SY Essack Science of The Total Environment 692, 868-878, 2019 | 57 | 2019 |
Rapid replacement of the Beta variant by the Delta variant in South Africa H Tegally, E Wilkinson, CL Althaus, M Giovanetti, JE San, J Giandhari, ... MedRxiv, 2021.09. 23.21264018, 2021 | 55 | 2021 |