DNA Sudoku—harnessing high-throughput sequencing for multiplexed specimen analysis Y Erlich, K Chang, A Gordon, R Ronen, O Navon, M Rooks, GJ Hannon Genome research 19 (7), 1243-1253, 2009 | 188 | 2009 |
Whole-genome sequencing uncovers the genetic basis of chronic mountain sickness in Andean highlanders D Zhou, N Udpa, R Ronen, T Stobdan, J Liang, O Appenzeller, HW Zhao, ... The American Journal of Human Genetics 93 (3), 452-462, 2013 | 150 | 2013 |
Learning natural selection from the site frequency spectrum R Ronen, N Udpa, E Halperin, V Bafna Genetics 195 (1), 181-193, 2013 | 121 | 2013 |
miRNAkey: a software for microRNA deep sequencing analysis R Ronen, I Gan, S Modai, A Sukacheov, G Dror, E Halperin, N Shomron Bioinformatics 26 (20), 2615-2616, 2010 | 107 | 2010 |
Whole genome sequencing of Ethiopian highlanders reveals conserved hypoxia tolerance genes N Udpa, R Ronen, D Zhou, J Liang, T Stobdan, O Appenzeller, Y Yin, ... Genome biology 15, 1-14, 2014 | 98 | 2014 |
SEQuel: improving the accuracy of genome assemblies R Ronen, C Boucher, H Chitsaz, P Pevzner Bioinformatics 28 (12), i188-i196, 2012 | 80 | 2012 |
Endothelin receptor B, a candidate gene from human studies at high altitude, improves cardiac tolerance to hypoxia in genetically engineered heterozygote mice T Stobdan, D Zhou, E Ao-Ieong, D Ortiz, R Ronen, I Hartley, Z Gan, ... Proceedings of the National Academy of Sciences 112 (33), 10425-10430, 2015 | 54 | 2015 |
Misassembly detection using paired-end sequence reads and optical mapping data MD Muggli, SJ Puglisi, R Ronen, C Boucher Bioinformatics 31 (12), i80-i88, 2015 | 50 | 2015 |
The genetic basis of chronic mountain sickness R Ronen, D Zhou, V Bafna, GG Haddad Physiology 29 (6), 403-412, 2014 | 41 | 2014 |
Senp1 drives hypoxia-induced polycythemia via GATA1 and Bcl-xL in subjects with Monge’s disease P Azad, HW Zhao, PJ Cabrales, R Ronen, D Zhou, O Poulsen, ... Journal of Experimental Medicine 213 (12), 2729-2744, 2016 | 35 | 2016 |
Vaccinia virus infection suppresses the cell microRNA machinery M Grinberg, S Gilad, E Meiri, A Levy, O Isakov, R Ronen, N Shomron, ... Archives of virology 157, 1719-1727, 2012 | 29 | 2012 |
A distributed network for intensive longitudinal monitoring in metastatic triple-negative breast cancer CA Blau, AB Ramirez, S Blau, CC Pritchard, MO Dorschner, ... Journal of the National Comprehensive Cancer Network 14 (1), 8-17, 2016 | 28 | 2016 |
Predicting carriers of ongoing selective sweeps without knowledge of the favored allele R Ronen, G Tesler, A Akbari, S Zakov, NA Rosenberg, V Bafna PLoS genetics 11 (9), e1005527, 2015 | 21 | 2015 |
Novel insight into the non-coding repertoire through deep sequencing analysis O Isakov, R Ronen, J Kovarsky, A Gabay, I Gan, S Modai, N Shomron Nucleic acids research 40 (11), e86-e86, 2012 | 19 | 2012 |
SEQuel: improving the accuracy of genome assemblies. Bioinformatics 28: i188–i196 R Ronen, C Boucher, H Chitsaz, P Pevzner | 8 | 2012 |
Pathway-level mutation analysis in primary high-grade serous ovarian cancer and matched brain metastases R Duchnowska, AM Supernat, R Pęksa, M Łukasiewicz, T Stokowy, ... Scientific Reports 12 (1), 20537, 2022 | 5 | 2022 |
Systematic analysis of genetic and pathway determinants of eribulin sensitivity across 100 human cancer cell lines from the cancer cell line encyclopedia (CCLE) P Sachdev, R Ronen, J Dutkowski, BA Littlefield Cancers 14 (18), 4532, 2022 | 4 | 2022 |
Safety, feasibility, and merits of longitudinal molecular testing of multiple metastatic sites to inform mTNBC patient treatment in the intensive trial of omics in cancer KA Burton, E Mahen, EQ Konnick, S Blau, MO Dorschner, AB Ramirez, ... JCO Precision Oncology 6, e2100280, 2022 | 1 | 2022 |
Developing a blood‐derived gene expression biomarker specific for Alzheimer’s disease A Korukonda, J Dutkowski, R Ronen, P Sachdev Alzheimer's & Dementia 17, e053842, 2021 | 1 | 2021 |
Haplotype Allele Frequency (HAF) score: predicting carriers of ongoing selective sweeps without knowledge of the adaptive allele R Ronen, G Tesler, A Akbari, S Zakov, NA Rosenberg, V Bafna International Conference on Research in Computational Molecular Biology, 276-280, 2015 | 1 | 2015 |