| Determinants of community structure in the global plankton interactome G Lima-Mendez, K Faust, N Henry, J Decelle, S Colin, F Carcillo, ... Science 348 (6237), 1262073, 2015 | 889 | 2015 |
| Plankton networks driving carbon export in the oligotrophic ocean L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ... Nature 532 (7600), 465-470, 2016 | 727 | 2016 |
| Patterns and ecological drivers of ocean viral communities JR Brum, JC Ignacio-Espinoza, S Roux, G Doulcier, SG Acinas, A Alberti, ... Science 348 (6237), 1261498, 2015 | 695 | 2015 |
| Genomic analysis of oceanic cyanobacterial myoviruses compared with T4‐like myoviruses from diverse hosts and environments MB Sullivan, KH Huang, JC Ignacio‐Espinoza, AM Berlin, L Kelly, ... Environmental microbiology 12 (11), 3035-3056, 2010 | 358 | 2010 |
| Viral tagging reveals discrete populations in Synechococcus viral genome sequence space L Deng, JC Ignacio-Espinoza, AC Gregory, BT Poulos, JS Weitz, ... Nature 513 (7517), 242-245, 2014 | 204 | 2014 |
| Phylogenomics of T4 cyanophages: lateral gene transfer in the ‘core’and origins of host genes JC Ignacio‐Espinoza, MB Sullivan Environmental microbiology 14 (8), 2113-2126, 2012 | 122 | 2012 |
| Sequencing platform and library preparation choices impact viral metagenomes SA Solonenko, JC Ignacio-Espinoza, A Alberti, C Cruaud, S Hallam, ... BMC genomics 14, 1-12, 2013 | 114 | 2013 |
| A network-based integrated framework for predicting virus–prokaryote interactions W Wang, J Ren, K Tang, E Dart, JC Ignacio-Espinoza, JA Fuhrman, ... NAR genomics and bioinformatics 2 (2), lqaa044, 2020 | 96 | 2020 |
| Genomic differentiation among wild cyanophages despite widespread horizontal gene transfer AC Gregory, SA Solonenko, JC Ignacio-Espinoza, K LaButti, A Copeland, ... BMC genomics 17, 1-13, 2016 | 96 | 2016 |
| Illuminating structural proteins in viral “dark matter” with metaproteomics JR Brum, JC Ignacio-Espinoza, EH Kim, G Trubl, RM Jones, S Roux, ... Proceedings of the National Academy of Sciences 113 (9), 2436-2441, 2016 | 90 | 2016 |
| Dynamic marine viral infections and major contribution to photosynthetic processes shown by spatiotemporal picoplankton metatranscriptomes ET Sieradzki, JC Ignacio-Espinoza, DM Needham, EB Fichot, JA Fuhrman Nature communications 10 (1), 1169, 2019 | 79 | 2019 |
| The global virome: not as big as we thought? JC Ignacio-Espinoza, SA Solonenko, MB Sullivan Current opinion in virology 3 (5), 566-571, 2013 | 78 | 2013 |
| Long-term stability and Red Queen-like strain dynamics in marine viruses JC Ignacio-Espinoza, NA Ahlgren, JA Fuhrman Nature Microbiology 5 (2), 265-271, 2020 | 76 | 2020 |
| Benchmarking microbial growth rate predictions from metagenomes AM Long, S Hou, JC Ignacio-Espinoza, JA Fuhrman The ISME journal 15 (1), 183-195, 2021 | 58 | 2021 |
| Tara Oceans Consortium Coordinators L Guidi, S Chaffron, L Bittner, D Eveillard, A Larhlimi, S Roux, Y Darzi, ... Stemmann L, Not F, Hingamp P, Speich S, Follows M, Karp-Boss L, Boss E …, 2016 | 50 | 2016 |
| Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca … MA Martinez, BJ Woodcroft, JCI Espinoza, AA Zayed, CM Singleton, ... Systematic and applied microbiology 42 (1), 54-66, 2019 | 24 | 2019 |
| Life-Style and Genome Structure of Marine Pseudoalteromonas Siphovirus B8b Isolated from the Northwestern Mediterranean Sea E Lara, K Holmfeldt, N Solonenko, EL Sà, JC Ignacio-Espinoza, ... PLoS One 10 (1), e0114829, 2015 | 20 | 2015 |
| Ribosome-linked mRNA-rRNA chimeras reveal active novel virus host associations JC Ignacio-Espinoza, SM Laperriere, YC Yeh, J Weissman, S Hou, ... BioRxiv, 2020.10. 30.332502, 2020 | 15 | 2020 |
| Tara oceans coordinators, Bork P, Bowler C, Sunagawa S, Wincker P, Karsenti E, Sullivan MB. Ocean plankton Patterns and ecological drivers of ocean viral communities JR Brum, JC Ignacio-Espinoza, S Roux, G Doulcier, SG Acinas, A Alberti, ... Science 348 (6237), 1261498, 2015 | 13 | 2015 |
| Closing the gaps on the viral photosystem‐I psaDCAB gene organization S Roitman, J Flores‐Uribe, A Philosof, B Knowles, F Rohwer, ... Environmental microbiology 17 (12), 5100-5108, 2015 | 10 | 2015 |
