Engineering microbial consortia for controllable outputs SR Lindemann, HC Bernstein, HS Song, JK Fredrickson, MW Fields, ... The ISME journal 10 (9), 2077-2084, 2016 | 330 | 2016 |
Microbial consortia engineering for cellular factories: in vitro to in silico systems HC Bernstein, RP Carlson Computational and structural biotechnology journal 3 (4), e201210017, 2012 | 144 | 2012 |
Synthetic Escherichia coli consortia engineered for syntrophy demonstrate enhanced biomass productivity HC Bernstein, SD Paulson, RP Carlson Journal of biotechnology 157 (1), 159-166, 2012 | 138 | 2012 |
Microsensor and transcriptomic signatures of oxygen depletion in biofilms associated with chronic wounds GA James, A Ge Zhao, M Usui, RA Underwood, H Nguyen, H Beyenal, ... Wound Repair and Regeneration 24 (2), 373-383, 2016 | 121 | 2016 |
Microbial community metabolic modeling: a community data‐driven network reconstruction CS Henry, HC Bernstein, P Weisenhorn, RC Taylor, JY Lee, J Zucker, ... Journal of cellular physiology 231 (11), 2339-2345, 2016 | 115 | 2016 |
Iron induces bimodal population development by Escherichia coli WH DePas, DA Hufnagel, JS Lee, LP Blanco, HC Bernstein, ST Fisher, ... Proceedings of the National Academy of Sciences 110 (7), 2629-2634, 2013 | 115 | 2013 |
Inference of interactions in cyanobacterial–heterotrophic co-cultures via transcriptome sequencing AS Beliaev, MF Romine, M Serres, HC Bernstein, BE Linggi, LM Markillie, ... The ISME journal 8 (11), 2243-2255, 2014 | 106 | 2014 |
EcoFABs: advancing microbiome science through standardized fabricated ecosystems K Zengler, K Hofmockel, NS Baliga, SW Behie, HC Bernstein, JB Brown, ... Nature methods 16 (7), 567-571, 2019 | 101 | 2019 |
Forfeiting the priority effect: turnover defines bioilm community succession CJ Brislawn, EB Graham, K Dana, P Ihardt, SJ Fansler, WB Chrisler, ... The ISME Journal 10, 11, 2019 | 95 | 2019 |
A flexible microbial co-culture platform for simultaneous utilization of methane and carbon dioxide from gas feedstocks EA Hill, WB Chrisler, AS Beliaev, HC Bernstein Bioresource technology 228, 250-256, 2017 | 66 | 2017 |
Selection, succession, and stabilization of soil microbial consortia EK Zegeye, CJ Brislawn, Y Farris, SJ Fansler, KS Hofmockel, JK Jansson, ... Msystems 4 (4), 10.1128/msystems. 00055-19, 2019 | 65* | 2019 |
Direct measurement and characterization of active photosynthesis zones inside wastewater remediating and biofuel producing microalgal biofilms HC Bernstein, M Kesaano, K Moll, T Smith, R Gerlach, RP Carlson, ... Bioresource technology 156, 206-215, 2014 | 65 | 2014 |
Effect of mono- and dichromatic light quality on growth rates and photosynthetic performance of Synechococcus sp. PCC 7002 HC Bernstein, A Konopka, MR Melnicki, EA Hill, LA Kucek, S Zhang, ... Frontiers in microbiology 5, 488, 2014 | 50 | 2014 |
Unlocking the constraints of cyanobacterial productivity: acclimations enabling ultrafast growth HC Bernstein, RS McClure, EA Hill, LM Markillie, WB Chrisler, MF Romine, ... MBio 7 (4), 10.1128/mbio. 00949-16, 2016 | 47 | 2016 |
Robustness analysis of culturing perturbations on Escherichia coli colony biofilm beta-lactam and aminoglycoside antibiotic tolerance TR Zuroff, H Bernstein, J Lloyd-Randolfi, L Jimenez-Taracido, PS Stewart, ... BMC microbiology 10, 1-10, 2010 | 45 | 2010 |
Assembly and succession of iron oxide microbial mat communities in acidic geothermal springs JP Beam, HC Bernstein, ZJ Jay, MA Kozubal, RM Jennings, SG Tringe, ... Frontiers in Microbiology 7, 25, 2016 | 35 | 2016 |
Trade-offs between microbiome diversity and productivity in a stratified microbial mat HC Bernstein, C Brislawn, RS Renslow, K Dana, B Morton, ... The ISME journal 11 (2), 405-414, 2017 | 33 | 2017 |
Phenotypic responses to interspecies competition and commensalism in a naturally-derived microbial co-culture N Khan, Y Maezato, RS McClure, CJ Brislawn, JM Mobberley, N Isern, ... Scientific reports 8 (1), 297, 2018 | 30 | 2018 |
In situ analysis of oxygen consumption and diffusive transport in high‐temperature acidic iron‐oxide microbial mats HC Bernstein, JP Beam, MA Kozubal, RP Carlson, WP Inskeep Environmental microbiology 15 (8), 2360-2370, 2013 | 30 | 2013 |
Interpreting and designing microbial communities for bioprocess applications, from components to interactions to emergent properties AE Beck, KA Hunt, HC Bernstein, RP Carlson Biotechnology for biofuel production and optimization, 407-432, 2016 | 29 | 2016 |