| Structural landscape of base pairs containing post-transcriptional modifications in RNA PP Seelam, P Sharma, A Mitra RNA 23 (6), 847-859, 2017 | 35 | 2017 |
| Estimating Strengths of Individual Hydrogen Bonds in RNA Base Pairs: Toward a Consensus between Different Computational Approaches A Halder, D Data, PP Seelam, D Bhattacharyya, A Mitra ACS Omega 4 (4), 7354-7368, 2019 | 26 | 2019 |
| RNABP COGEST: a resource for investigating functional RNAs S Bhattacharya, S Mittal, S Panigrahi, P Sharma, R Paul, S Halder, ... Database 2015, bav011, 2015 | 19 | 2015 |
| Posttranscriptional modifications at the 37th position in the anticodon stem–loop of tRNA: structural insights from MD simulations PS Prabhakar, NA Takyi, SD Wetmore RNA 27 (2), 202-220, 2021 | 17 | 2021 |
| Structural Patterns and Stabilities of Hydrogen-Bonded Pairs Involving Ribonucleotide Bases and Arginine, Glutamic Acid, or Glutamine Residues of Proteins from Quantum … D Kagra, PS Prabhakar, KD Sharma, P Sharma ACS omega 5 (7), 3612-3623, 2020 | 15 | 2020 |
| Lighting Up the Thrombin-Binding Aptamer G-Quadruplex with an Internal Cyanine-Indole-Quinolinium Nucleobase Surrogate. Direct Fluorescent Intensity Readout for Thrombin … MD Gray, PS Deore, AJ Chung, AJ Van Riesen, RA Manderville, ... Bioconjugate Chemistry 31 (11), 2596-2606, 2020 | 13 | 2020 |
| Impact of the Position of the Chemically Modified 5-Furyl-2′-Deoxyuridine Nucleoside on the Thrombin DNA Aptamer–Protein Complex: Structural Insights into Aptamer Response … P Seelam Prabhakar, R A Manderville, S D Wetmore Molecules 24 (16), 2908, 2019 | 12 | 2019 |
| Higher order structures involving post transcriptionally modified nucleobases in RNA PP Seelam, P Sharma, A Mitra RSC Advances 7 (57), 35694-35703, 2017 | 12 | 2017 |
| Pairing interactions between nucleobases and ligands in aptamer: ligand complexes of riboswitches: crystal structure analysis, classification, optimal structures, and accurate … PP Seelam, A Mitra, P Sharma RNA 25 (10), 1274-1290, 2019 | 10 | 2019 |
| Interaction of aspartic acid and asparagine with RNA nucleobases: a quantum chemical view D Kagra, SP Preethi, P Sharma Journal of Biomolecular Structure and Dynamics 38 (3), 943-955, 2020 | 9 | 2020 |
| Influence of the Effect of the Number, Nature and Position of Methyl Posttranscriptional Modifications on Nucleobase Stacking in RNA D Kagra, AS Mahmi, NVS Kumar, PS Prabhakar, P Sharma ChemPhysChem, 2021 | 6 | 2021 |
| Molecular Dynamics Simulations of the Aptamer Domain of Guanidinium Ion Binding Riboswitch ykkC-III: Structural Insights into the Discrimination of Cognate and … I Negi, AS Mahmi, P Seelam Prabhakar, P Sharma Journal of Chemical Information and Modeling 61 (10), 5243-5255, 2021 | 5 | 2021 |
| A quantum chemical view of the interaction of RNA nucleobases and base pairs with the side chains of polar amino acids A Ohri, P P. Seelam, P Sharma Journal of Biomolecular Structure and Dynamics 39 (15), 5411-5426, 2021 | 2 | 2021 |
| MOLECULAR LEVEL UNDERSTANDING OF MODIFIED BASE PAIRS, NUCLEOBASE-LIGAND PSEUDO PAIRS AND ASSOCIATED HIGHER ORDER STRUCTURES IN FUNCTIONAL RNA SP Preethi | | 2018 |
| MOLECULAR FEATURES OF LIGAND RECOGNITION IN PREQ1 RIBOSWITCH A QUANTUM CHEMICAL STUDY SP Preethi | | 2012 |
