MicroRNA-184 inhibits neuroblastoma cell survival through targeting the serine/threonine kinase AKT2 NH Foley, IM Bray, A Tivnan, K Bryan, DM Murphy, PG Buckley, J Ryan, ... Molecular Cancer, 2010 | 192 | 2010 |
MiRNA-335 Suppresses Neuroblastoma Cell Invasiveness By Direct Targeting of Multiple Genes from the non-Canonical TGF-β Signalling Pathway J Lynch, J Fay, M Meehan, K Bryan, KM Watters, DM Murphy, RL Stallings Carcinogenesis, 2012 | 179 | 2012 |
Differential DNA methylation profiles of coding and non-coding genes define hippocampal sclerosis in human temporal lobe epilepsy SFC Miller-Delaney, K Bryan, S Das, RC McKiernan, IM Bray, ... Brain 138 (3), 616-631, 2015 | 177 | 2015 |
MicroRNAs 10a and 10b are potent inducers of neuroblastoma cell differentiation through targeting of nuclear receptor corepressor 2 NH Foley, I Bray, KM Watters, S Das, K Bryan, T Bernas, JHM Prehn, ... Cell Death & Differentiation 18 (7), 1089-1098, 2011 | 161 | 2011 |
DyNet: visualization and analysis of dynamic molecular interaction networks IH Goenawan, K Bryan, DJ Lynn Bioinformatics 32 (17), 2713-2715, 2016 | 147 | 2016 |
MicroRNA-204 increases sensitivity of neuroblastoma cells to cisplatin and is associated with a favourable clinical outcome J Ryan, A Tivnan, J Fay, K Bryan, M Meehan, L Creevey, J Lynch, IM Bray, ... British journal of cancer 107 (6), 967-976, 2012 | 144 | 2012 |
Widespread dysregulation of MiRNAs by MYCN amplification and chromosomal imbalances in neuroblastoma: association of miRNA expression with survival I Bray, K Bryan, S Prenter, PG Buckley, NH Foley, DM Murphy, L Alcock, ... PLoS One 4 (11), e7850, 2009 | 144 | 2009 |
MicroRNA mediates DNA demethylation events triggered by retinoic acid during neuroblastoma cell differentiation S Das, N Foley, K Bryan, KM Watters, I Bray, DM Murphy, PG Buckley, ... Cancer research 70 (20), 7874-7881, 2010 | 134 | 2010 |
MiR‐137 functions as a tumor suppressor in neuroblastoma by downregulating KDM1A K Althoff, A Beckers, A Odersky, P Mestdagh, J Köster, IM Bray, K Bryan, ... International journal of cancer 133 (5), 1064-1073, 2013 | 132 | 2013 |
Application of simulated annealing to the biclustering of gene expression data K Bryan, P Cunningham, N Bolshakova Information Technology in Biomedicine, IEEE Transactions on 10 (3), 519-525, 2006 | 132 | 2006 |
Biclustering of expression data using simulated annealing K Bryan, P Cunningham, N Bolshakova Computer-Based Medical Systems, 2005. Proceedings. 18th IEEE Symposium on …, 2005 | 129 | 2005 |
Differential DNA methylation patterns define status epilepticus and epileptic tolerance SFC Miller-Delaney, S Das, T Sano, EM Jimenez-Mateos, K Bryan, ... Journal of Neuroscience 32 (5), 1577-1588, 2012 | 125 | 2012 |
Unsupervised retrieval of attack profiles in collaborative recommender systems K Bryan, M O'Mahony, P Cunningham Proceedings of the 2008 ACM conference on Recommender systems, 155-162, 2008 | 114 | 2008 |
MicroRNA-542-5p as a novel tumor suppressor in neuroblastoma I Bray, A Tivnan, K Bryan, NH Foley, KM Watters, L Tracey, AM Davidoff, ... Cancer Letters 303 (1), 56-64, 2011 | 108 | 2011 |
Using biological networks to integrate, visualize and analyze genomics data T Charitou, K Bryan, DJ Lynn Genetics Selection Evolution 48, 1-12, 2016 | 105 | 2016 |
miRNA expression profiling enables risk stratification in archived and fresh neuroblastoma tumor samples K De Preter, P Mestdagh, J Vermeulen, F Zeka, A Naranjo, I Bray, ... Clinical Cancer Research, 2011 | 104 | 2011 |
Modulation of neuroblastoma disease pathogenesis by an extensive network of epigenetically regulated microRNAs S Das, K Bryan, PG Buckley, O Piskareva, IM Bray, N Foley, J Ryan, ... Oncogene 32 (24), 2927-2936, 2013 | 101 | 2013 |
Global MYCN transcription factor binding analysis in neuroblastoma reveals association with distinct E-box motifs and regions of DNA hypermethylation DM Murphy, PG Buckley, K Bryan, S Das, L Alcock, NH Foley, S Prenter, ... PloS one 4 (12), e8154, 2009 | 94 | 2009 |
miRNA profiles as a predictor of chemoresponsiveness in Wilms’ tumor blastema JA Watson, K Bryan, R Williams, S Popov, G Vujanic, A Coulomb, ... PloS one 8 (1), e53417, 2013 | 89 | 2013 |
Chromosomal and MicroRNA Expression Patterns Reveal Biologically Distinct Subgroups of 11q- Neuroblastoma PG Buckley, L Alcock, K Bryan, I Bray, JH Schulte, A Schramm, A Eggert, ... Clinical Cancer Research 16 (11), 2971, 2010 | 78 | 2010 |