ExPASy: SIB bioinformatics resource portal P Artimo, M Jonnalagedda, K Arnold, D Baratin, G Csardi, E De Castro, ... Nucleic acids research 40 (W1), W597-W603, 2012 | 2390 | 2012 |
T-Coffee: a web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension P Di Tommaso, S Moretti, I Xenarios, M Orobitg, A Montanyola, JM Chang, ... Nucleic acids research 39 (suppl_2), W13-W17, 2011 | 1227 | 2011 |
Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee F Armougom, S Moretti, O Poirot, S Audic, P Dumas, B Schaeli, V Keduas, ... Nucleic acids research 34 (suppl_2), W604-W608, 2006 | 590 | 2006 |
The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods S Moretti, F Armougom, IM Wallace, DG Higgins, CV Jongeneel, ... Nucleic acids research 35 (suppl_2), W645-W648, 2007 | 263 | 2007 |
Bgee: integrating and comparing heterogeneous transcriptome data among species F Bastian, G Parmentier, J Roux, S Moretti, V Laudet, ... Data Integration in the Life Sciences: 5th International Workshop, DILS 2008 …, 2008 | 211 | 2008 |
Tools and data services registry: a community effort to document bioinformatics resources J Ison, K Rapacki, H Ménager, M Kalaš, E Rydza, P Chmura, C Anthon, ... Nucleic acids research 44 (D1), D38-D47, 2016 | 176 | 2016 |
MetaNetX/MNXref–reconciliation of metabolites and biochemical reactions to bring together genome-scale metabolic networks S Moretti, O Martin, T Van Du Tran, A Bridge, A Morgat, M Pagni Nucleic acids research 44 (D1), D523-D526, 2016 | 172 | 2016 |
Patterns of positive selection in seven ant genomes J Roux, E Privman, S Moretti, JT Daub, M Robinson-Rechavi, L Keller Molecular biology and evolution 31 (7), 1661-1685, 2014 | 157 | 2014 |
The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals FB Bastian, J Roux, A Niknejad, A Comte, SS Fonseca Costa, ... Nucleic acids research 49 (D1), D831-D847, 2021 | 145 | 2021 |
MetaNetX. org: a website and repository for accessing, analysing and manipulating metabolic networks M Ganter, T Bernard, S Moretti, J Stelling, M Pagni Bioinformatics 29 (6), 815-816, 2013 | 126 | 2013 |
MetaNetX/MNXref: unified namespace for metabolites and biochemical reactions in the context of metabolic models S Moretti, VDT Tran, F Mehl, M Ibberson, M Pagni Nucleic acids research 49 (D1), D570-D574, 2021 | 117 | 2021 |
The hourglass and the early conservation models—co-existing patterns of developmental constraints in vertebrates B Piasecka, P Lichocki, S Moretti, S Bergmann, M Robinson-Rechavi PLoS genetics 9 (4), e1003476, 2013 | 106 | 2013 |
Reconciliation of metabolites and biochemical reactions for metabolic networks T Bernard, A Bridge, A Morgat, S Moretti, I Xenarios, M Pagni Briefings in bioinformatics 15 (1), 123-135, 2014 | 77 | 2014 |
Selectome update: quality control and computational improvements to a database of positive selection S Moretti, B Laurenczy, WH Gharib, B Castella, A Kuzniar, H Schabauer, ... Nucleic acids research 42 (D1), D917-D921, 2014 | 75 | 2014 |
Updates in Rhea—an expert curated resource of biochemical reactions A Morgat, T Lombardot, KB Axelsen, L Aimo, A Niknejad, ... Nucleic acids research, gkw990, 2016 | 74 | 2016 |
R-Coffee: a web server for accurately aligning noncoding RNA sequences S Moretti, A Wilm, DG Higgins, I Xenarios, C Notredame Nucleic acids research 36 (suppl_2), W10-W13, 2008 | 69 | 2008 |
The iRMSD: a local measure of sequence alignment accuracy using structural information F Armougom, S Moretti, V Keduas, C Notredame Bioinformatics 22 (14), e35-e39, 2006 | 68 | 2006 |
Detection of pathways affected by positive selection in primate lineages ancestral to humans JT Daub, S Moretti, II Davydov, L Excoffier, M Robinson-Rechavi Molecular biology and evolution 34 (6), 1391-1402, 2017 | 61 | 2017 |
Selectome: a database of positive selection E Proux, RA Studer, S Moretti, M Robinson-Rechavi Nucleic acids research 37 (suppl_1), D404-D407, 2009 | 53 | 2009 |
The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases SIB Swiss Institute of Bioinformatics Members Nucleic acids research 44 (D1), D27-D37, 2016 | 51 | 2016 |