| MedlineRanker: flexible ranking of biomedical literature JF Fontaine, A Barbosa-Silva, M Schaefer, MR Huska, EM Muro, ... Nucleic acids research 37 (suppl_2), W141-W146, 2009 | 136 | 2009 |
| A reference guide for tree analysis and visualization GA Pavlopoulos, TG Soldatos, A Barbosa-Silva, R Schneider BioData mining 3, 1-24, 2010 | 116 | 2010 |
| uORFdb—a comprehensive literature database on eukaryotic uORF biology K Wethmar, A Barbosa-Silva, MA Andrade-Navarro, A Leutz Nucleic acids research 42 (D1), D60-D67, 2014 | 102 | 2014 |
| Moving pieces in a taxonomic puzzle: venom 2D-LC/MS and data clustering analyses to infer phylogenetic relationships in some scorpions from the Buthidae family (Scorpiones) DG Nascimento, B Rates, DM Santos, T Verano-Braga, A Barbosa-Silva, ... Toxicon 47 (6), 628-639, 2006 | 102 | 2006 |
| Genie: literature-based gene prioritization at multi genomic scale JF Fontaine, F Priller, A Barbosa-Silva, MA Andrade-Navarro Nucleic acids research 39 (suppl_2), W455-W461, 2011 | 100 | 2011 |
| PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries A Barbosa-Silva, JF Fontaine, ER Donnard, F Stussi, JM Ortega, ... BMC bioinformatics 12, 1-9, 2011 | 70 | 2011 |
| Integration and visualization of translational medicine data for better understanding of human diseases V Satagopam, W Gu, S Eifes, P Gawron, M Ostaszewski, S Gebel, ... Big data 4 (2), 97-108, 2016 | 56 | 2016 |
| Laitor-literature assistant for identification of terms co-occurrences and relationships A Barbosa-Silva, TG Soldatos, ILF Magalhães, GA Pavlopoulos, ... BMC bioinformatics 11, 1-10, 2010 | 48 | 2010 |
| Martini: using literature keywords to compare gene sets TG Soldatos, SI O'Donoghue, VP Satagopam, LJ Jensen, NP Brown, ... Nucleic acids research 38 (1), 26-38, 2010 | 31 | 2010 |
| Abundance and diversity of resistance genes in the sugarcane transcriptome revealed by in silico analysis. AC Wanderley-Nogueira, NM Soares-Cavalcanti, DAL Morais, ... Genetics and Molecular Research 6 (4), 2007 | 31 | 2007 |
| Mapping global dynamics of benchmark creation and saturation in artificial intelligence S Ott, A Barbosa-Silva, K Blagec, J Brauner, M Samwald Nature Communications 13 (1), 6793, 2022 | 30* | 2022 |
| A curated, ontology-based, large-scale knowledge graph of artificial intelligence tasks and benchmarks K Blagec, A Barbosa-Silva, S Ott, M Samwald Scientific Data 9 (1), 322, 2022 | 30 | 2022 |
| In silico survey of resistance (R) genes in Eucalyptus transcriptome A Barbosa-da-Silva, AC Wanderley-Nogueira, RRM Silva, LC Berlarmino, ... Genetics and Molecular Biology 28, 562-574, 2005 | 30 | 2005 |
| SmartR: an open-source platform for interactive visual analytics for translational research data S Herzinger, W Gu, V Satagopam, S Eifes, K Rege, A Barbosa-Silva, ... Bioinformatics 33 (14), 2229-2231, 2017 | 28 | 2017 |
| Modulation of defence and iron homeostasis genes in rice roots by the diazotrophic endophyte Herbaspirillum seropedicae LCC Brusamarello-Santos, D Alberton, G Valdameri, D Camilios-Neto, ... Scientific reports 9 (1), 10573, 2019 | 26 | 2019 |
| Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence A Barbosa-Silva, VP Satagopam, R Schneider, JM Ortega BMC bioinformatics 9, 1-14, 2008 | 16 | 2008 |
| A procedure to recruit members to enlarge protein family databases--the building of UECOG (UniRef-Enriched COG Database) as a model. GR Fernandes, A Barbosa Da Silva, F Prosdocimi, IA Pena, ... Genetics and Molecular Research 7 (3), 2008 | 16 | 2008 |
| Preimplantation development regulatory pathway construction through a text-mining approach E Donnard, A Barbosa-Silva, RLM Guedes, GR Fernandes, H Velloso, ... BMC genomics 12, 1-13, 2011 | 15 | 2011 |
| RA-MAP, molecular immunological landscapes in early rheumatoid arthritis and healthy vaccine recipients Scientific data 9 (1), 196, 2022 | 11 | 2022 |
| Caipirini: using gene sets to rank literature TG Soldatos, SI O'Donoghue, VP Satagopam, A Barbosa-Silva, ... BioData mining 5, 1-14, 2012 | 11 | 2012 |
Reinhard SchneiderProf. Bioinformatics, University of Luxembourg, Head of Bioinformatics Core Facility, Luxembourg在 uni.lu 的电子邮件经过验证
