Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020 E Alm, EK Broberg, T Connor, EB Hodcroft, AB Komissarov, ... Eurosurveillance 25 (32), 2001410, 2020 | 256 | 2020 |
Simulating Illumina metagenomic data with InSilicoSeq H Gourlé, O Karlsson-Lindsjö, J Hayer, E Bongcam-Rudloff Bioinformatics 35 (3), 521-522, 2019 | 160 | 2019 |
Metagenomic detection of viral pathogens in Spanish honeybees: co-infection by aphid lethal paralysis, Israel acute paralysis and Lake Sinai viruses F Granberg, M Vicente-Rubiano, C Rubio-Guerri, OE Karlsson, ... PloS one 8 (2), e57459, 2013 | 144 | 2013 |
Microbial community adaptability to altered temperature conditions determines the potential for process optimisation in biogas production M Westerholm, S Isaksson, OK Lindsjö, A Schnürer Applied Energy 226, 838-848, 2018 | 118 | 2018 |
New viruses in veterinary medicine, detected by metagenomic approaches S Belák, OE Karlsson, AL Blomström, M Berg, F Granberg Veterinary microbiology 165 (1-2), 95-101, 2013 | 77 | 2013 |
Detection of novel syntrophic acetate‐oxidizing bacteria from biogas processes by continuous acetate enrichment approaches M Westerholm, B Müller, A Singh, O Karlsson Lindsjö, A Schnürer Microbial biotechnology 11 (4), 680-693, 2018 | 67 | 2018 |
The effect of preprocessing by sequence-independent, single-primer amplification (SISPA) on metagenomic detection of viruses OE Karlsson, S Belák, F Granberg Biosecurity and bioterrorism: biodefense strategy, practice, and science 11 …, 2013 | 64 | 2013 |
Resistance to pyrantel embonate and efficacy of fenbendazole in Parascaris univalens on Swedish stud farms F Martin, J Höglund, TF Bergström, OK Lindsjö, E Tydén Veterinary parasitology 264, 69-73, 2018 | 54 | 2018 |
The intestinal eukaryotic virome in healthy and diarrhoeic neonatal piglets OE Karlsson, J Larsson, J Hayer, M Berg, M Jacobson PloS one 11 (3), e0151481, 2016 | 42 | 2016 |
Identification of Transmission Routes of Campylobacter and On-Farm Measures to Reduce Campylobacter in Chicken S Frosth, O Karlsson-Lindsjö, A Niazi, LL Fernström, I Hansson Pathogens 9 (5), 363, 2020 | 36 | 2020 |
Intrauterine vertical SARS‐CoV‐2 infection: a case confirming transplacental transmission followed by divergence of the viral genome M Zaigham, A Holmberg, ML Karlberg, OK Lindsjö, L Jokubkiene, ... Bjog 128 (8), 1388, 2021 | 35 | 2021 |
Ten-Week Follow-Up of Monkeypox Case-Patient, Sweden, 2022. A Pettke, F Filén, K Widgren, A Jacks, H Glans, S Andreasson, ... Emerging infectious diseases 28 (10), 2074-2077, 2022 | 28 | 2022 |
Metagenomic detection methods in biopreparedness outbreak scenarios OE Karlsson, T Hansen, R Knutsson, C Löfström, F Granberg, M Berg Biosecurity and bioterrorism: biodefense strategy, practice, and science 11 …, 2013 | 23 | 2013 |
Transcriptional responses in Parascaris univalens after in vitro exposure to ivermectin, pyrantel citrate and thiabendazole F Martin, F Dube, O Karlsson Lindsjö, M Eydal, J Höglund, TF Bergström, ... Parasites & Vectors 13, 1-14, 2020 | 20 | 2020 |
High-throughput sequencing in veterinary infection biology and diagnostics S Belák, OE Karlsson, M Leijon, F Granberg Rev Sci Tech 32 (3), 893-915, 2013 | 20 | 2013 |
MetLab: An In Silico Experimental Design, Simulation and Analysis Tool for Viral Metagenomics Studies M Norling, OE Karlsson-Lindsjö, H Gourlé, E Bongcam-Rudloff, J Hayer PLoS One 11 (8), e0160334, 2016 | 16 | 2016 |
Cross-Sectional Variations in Structure and Function of Coral Reef Microbiome With Local Anthropogenic Impacts on the Kenyan Coast of the Indian Ocean S Wambua, H Gourlé, EP de Villiers, O Karlsson-Lindsjö, N Wambiji, ... Frontiers in Microbiology 12, 673128, 2021 | 9 | 2021 |
High Prevalence of SARS-CoV-2 Omicron Infection Despite High Seroprevalence, Sweden, 2022 R Groenheit, P Bacchus, I Galanis, K Sondén, I Bujila, T Efimova, F Garli, ... Emerging Infectious Diseases 29 (6), 1240, 2023 | 7 | 2023 |
Astrovirus VA1/HMO encephalitis after allogeneic hematopoietic cell transplantation: Significant role of immune competence in virus control L Król, D Turkiewicz, K Nordborg, E Englund, L Stenberg, ... Pediatric Blood & Cancer 68 (12), e29286, 2021 | 6 | 2021 |
Detection of an IMI-2 carbapenemase-producing Enterobacter asburiae at a Swedish feed mill S Börjesson, MSM Brouwer, E Östlund, J Eriksson, J Elving, OK Lindsjö, ... Frontiers in Microbiology 13, 2022 | 5 | 2022 |