A compendium of RNA-binding motifs for decoding gene regulation D Ray, H Kazan, KB Cook, MT Weirauch, HS Najafabadi, X Li, ... Nature 499 (7457), 172-177, 2013 | 1513 | 2013 |
The evolutionary landscape of alternative splicing in vertebrate species NL Barbosa-Morais, M Irimia, Q Pan, HY Xiong, S Gueroussov, LJ Lee, ... Science 338 (6114), 1587-1593, 2012 | 1125 | 2012 |
Elephant shark genome provides unique insights into gnathostome evolution B Venkatesh, AP Lee, V Ravi, AK Maurya, MM Lian, JB Swann, Y Ohta, ... Nature 505 (7482), 174-179, 2014 | 742 | 2014 |
Widespread intron retention in mammals functionally tunes transcriptomes U Braunschweig, NL Barbosa-Morais, Q Pan, EN Nachman, B Alipanahi, ... Genome research 24 (11), 1774-1786, 2014 | 672 | 2014 |
Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism NN Parikshak, V Swarup, TG Belgard, M Irimia, G Ramaswami, ... Nature 540 (7633), 423-427, 2016 | 654 | 2016 |
A highly conserved program of neuronal microexons is misregulated in autistic brains M Irimia, RJ Weatheritt, JD Ellis, NN Parikshak, ... Cell 159 (7), 1511-1523, 2014 | 614 | 2014 |
Tissue-specific alternative splicing remodels protein-protein interaction networks JD Ellis, M Barrios-Rodiles, R Colak, M Irimia, TH Kim, JA Calarco, ... Molecular cell 46 (6), 884-892, 2012 | 460 | 2012 |
Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs BA Curtis, G Tanifuji, F Burki, A Gruber, M Irimia, S Maruyama, MC Arias, ... Nature 492 (7427), 59-65, 2012 | 420 | 2012 |
An atlas of alternative splicing profiles and functional associations reveals new regulatory programs and genes that simultaneously express multiple major isoforms J Tapial, KCH Ha, T Sterne-Weiler, A Gohr, U Braunschweig, ... Genome research 27 (10), 1759-1768, 2017 | 354 | 2017 |
MBNL proteins repress ES-cell-specific alternative splicing and reprogramming H Han, M Irimia, PJ Ross, HK Sung, B Alipanahi, L David, A Golipour, ... Nature 498 (7453), 241-245, 2013 | 346 | 2013 |
Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling M Clarke, AJ Lohan, B Liu, I Lagkouvardos, S Roy, N Zafar, C Bertelli, ... Genome biology 14, 1-15, 2013 | 324 | 2013 |
5-hmC in the brain is abundant in synaptic genes and shows differences at the exon-intron boundary T Khare, S Pai, K Koncevicius, M Pal, E Kriukiene, Z Liutkeviciute, M Irimia, ... Nature structural & molecular biology 19 (10), 1037-1043, 2012 | 282 | 2012 |
A comparative transcriptomic analysis reveals conserved features of stem cell pluripotency in planarians and mammals RM Labbé, M Irimia, KW Currie, A Lin, SJ Zhu, DDR Brown, EJ Ross, ... Stem cells 30 (8), 1734-1745, 2012 | 242 | 2012 |
Amphioxus functional genomics and the origins of vertebrate gene regulation F Marlétaz, PN Firbas, I Maeso, JJ Tena, O Bogdanovic, M Perry, ... Nature 564 (7734), 64-70, 2018 | 234 | 2018 |
Alternative splicing: decoding an expansive regulatory layer M Irimia, BJ Blencowe Current opinion in cell biology 24 (3), 323-332, 2012 | 193 | 2012 |
Regulated aggregative multicellularity in a close unicellular relative of metazoa A Sebé-Pedrós, M Irimia, J Del Campo, H Parra-Acero, C Russ, ... Elife 2, e01287, 2013 | 191 | 2013 |
Origin of spliceosomal introns and alternative splicing M Irimia, SW Roy Cold Spring Harbor perspectives in biology 6 (6), a016071, 2014 | 187 | 2014 |
Essential roles for the splicing regulator nSR100/SRRM4 during nervous system development M Quesnel-Vallières, M Irimia, SP Cordes, BJ Blencowe Genes & development 29 (7), 746-759, 2015 | 151 | 2015 |
An alternative splicing event amplifies evolutionary differences between vertebrates S Gueroussov, T Gonatopoulos-Pournatzis, M Irimia, B Raj, ZY Lin, ... Science 349 (6250), 868-873, 2015 | 150 | 2015 |
MBNL1 and RBFOX2 cooperate to establish a splicing programme involved in pluripotent stem cell differentiation JP Venables, L Lapasset, G Gadea, P Fort, R Klinck, M Irimia, E Vignal, ... Nature communications 4 (1), 2480, 2013 | 150 | 2013 |