Mechanism of transcriptional bursting in bacteria S Chong, C Chen, H Ge, XS Xie Cell 158 (2), 314-326, 2014 | 416 | 2014 |
Enhanced efflux activity facilitates drug tolerance in dormant bacterial cells Y Pu, Z Zhao, Y Li, J Zou, Q Ma, Y Zhao, Y Ke, Y Zhu, H Chen, MAB Baker, ... Molecular cell 62 (2), 284-294, 2016 | 384 | 2016 |
Single-cell RNA-seq reveals the diversity of trophoblast subtypes and patterns of differentiation in the human placenta Y Liu, X Fan, R Wang, X Lu, YL Dang, H Wang, HY Lin, C Zhu, H Ge, ... Cell research 28 (8), 819-832, 2018 | 314 | 2018 |
Probing allostery through DNA S Kim, E Broströmer, D Xing, J Jin, S Chong, H Ge, S Wang, C Gu, L Yang, ... Science 339 (6121), 816-819, 2013 | 291 | 2013 |
Physical origins of entropy production, free energy dissipation, and their mathematical representations H Ge, H Qian Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 81 (5 …, 2010 | 256 | 2010 |
Genome‐wide study of mRNA degradation and transcript elongation in Escherichia coli H Chen, K Shiroguchi, H Ge, XS Xie Molecular systems biology 11 (1), 781, 2015 | 244 | 2015 |
TET-mediated DNA demethylation controls gastrulation by regulating Lefty–Nodal signalling HQ Dai, BA Wang, L Yang, JJ Chen, GC Zhu, ML Sun, H Ge, R Wang, ... Nature 538 (7626), 528-532, 2016 | 198 | 2016 |
Stochastic theory of nonequilibrium steady states. Part II: Applications in chemical biophysics H Ge, M Qian, H Qian Physics Reports 510 (3), 87-118, 2012 | 176 | 2012 |
Tracing the temporal-spatial transcriptome landscapes of the human fetal digestive tract using single-cell RNA-sequencing S Gao, L Yan, R Wang, J Li, J Yong, X Zhou, Y Wei, X Wu, X Wang, X Fan, ... Nature cell biology 20 (6), 721-734, 2018 | 141 | 2018 |
Stochastic phenotype transition of a single cell in an intermediate region of gene state switching H Ge, H Qian, XS Xie Physical review letters 114 (7), 078101, 2015 | 85 | 2015 |
Thermodynamic Limit of a Nonequilibrium Steady State: Maxwell-Type Construction<? format?> for a Bistable Biochemical System H Ge, H Qian Physical review letters 103 (14), 148103, 2009 | 75 | 2009 |
Landscapes of non-gradient dynamics without detailed balance: Stable limit cycles and multiple attractors H Ge, H Qian Chaos: An Interdisciplinary Journal of Nonlinear Science 22 (2), 023140-023140-8, 2012 | 66 | 2012 |
Mesoscopic kinetic basis of macroscopic chemical thermodynamics: A mathematical theory H Ge, H Qian Physical Review E 94 (5), 052150, 2016 | 64 | 2016 |
Non-equilibrium phase transition in mesoscopic biochemical systems: from stochastic to nonlinear dynamics and beyond H Ge, H Qian Journal of The Royal Society Interface 8 (54), 107-116, 2011 | 60 | 2011 |
Extended forms of the second law for general time-dependent stochastic processes H Ge Physical Review E 80 (2), 021137, 2009 | 60 | 2009 |
Mathematical formalism of nonequilibrium thermodynamics for nonlinear chemical reaction systems with general rate law H Ge, H Qian Journal of Statistical Physics 166, 190-209, 2017 | 50 | 2017 |
Markov processes follow from the principle of maximum caliber H Ge, S Pressé, K Ghosh, KA Dill The Journal of chemical physics 136 (6), 2012 | 49 | 2012 |
Dissipation, generalized free energy, and a self-consistent nonequilibrium thermodynamics of chemically driven open subsystems H Ge, H Qian Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 87 (6 …, 2013 | 44* | 2013 |
Nonequilibrium thermodynamic formalism of nonlinear chemical reaction systems with Waage–Guldberg’s law of mass action H Ge, H Qian Chemical Physics 472, 241-248, 2016 | 43 | 2016 |
Synchronized dynamics and non-equilibrium steady states in a stochastic yeast cell-cycle network H Ge, H Qian, M Qian Mathematical biosciences 211 (1), 132-152, 2008 | 40 | 2008 |