After the bottleneck: Genome-wide diversification of the Mycobacterium tuberculosis complex by mutation, recombination, and natural selection A Namouchi, X Didelot, U Schöck, B Gicquel, EPC Rocha Genome research 22 (4), 721-734, 2012 | 175 | 2012 |
Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period A Namouchi, M Guellil, O Kersten, S Hänsch, C Ottoni, BV Schmid, ... Proceedings of the National Academy of Sciences 115 (50), E11790-E11797, 2018 | 110 | 2018 |
Phylogeny of Mycobacterium tuberculosis Beijing Strains Constructed from Polymorphisms in Genes Involved in DNA Replication, Recombination and Repair O Mestre, T Luo, T Dos Vultos, K Kremer, A Murray, A Namouchi, ... PloS one 6 (1), e16020, 2011 | 109 | 2011 |
Tuberculosis due to resistant Haarlem strain, Tunisia H Mardassi, A Namouchi, R Haltiti, M Zarrouk, B Mhenni, A Karboul, ... Emerging Infectious Diseases 11 (6), 957, 2005 | 97 | 2005 |
Mycobacterium tuberculosis lineage 7 strains are associated with prolonged patient delay in seeking treatment for pulmonary tuberculosis in Amhara Region, Ethiopia SA Yimer, G Norheim, A Namouchi, ED Zegeye, W Kinander, T Tønjum, ... Journal of clinical microbiology 53 (4), 1301-1309, 2015 | 96 | 2015 |
Insights into the evolutionary history of tubercle bacilli as disclosed by genetic rearrangements within a PE_PGRS duplicated gene pair A Karboul, NC Gey van Pittius, A Namouchi, V Vincent, C Sola, N Rastogi, ... BMC Evolutionary Biology 6, 1-18, 2006 | 65 | 2006 |
A very virulent genotype of infectious bursal disease virus predominantly associated with recurrent infectious bursal disease outbreaks in Tunisian vaccinated flocks H Mardassi, N Khabouchi, A Ghram, A Namouchi, A Karboul Avian diseases 48 (4), 829-840, 2004 | 55 | 2004 |
A genomic and historical synthesis of plague in 18th century Eurasia M Guellil, O Kersten, A Namouchi, S Luciani, I Marota, CA Arcini, ... Proceedings of the National Academy of Sciences 117 (45), 28328-28335, 2020 | 51 | 2020 |
The Mycobacterium tuberculosis transcriptional landscape under genotoxic stress A Namouchi, M Gómez-Muñoz, SA Frye, LV Moen, T Rognes, T Tønjum, ... BMC genomics 17, 1-13, 2016 | 51 | 2016 |
Identification of DNA Binding Motifs of the Mycobacterium tuberculosis PhoP/PhoR Two-Component Signal Transduction System M Cimino, C Thomas, A Namouchi, S Dubrac, B Gicquel, DN Gopaul Public Library of Science 7 (8), e42876, 2012 | 46 | 2012 |
Genetic profiling of Mycobacterium tuberculosis in Tunisia: predominance and evidence for the establishment of a few genotypes A Namouchi, A Karboul, B Mhenni, N Khabouchi, R Haltiti, R Ben Hassine, ... Journal of Medical Microbiology 57 (7), 864-872, 2008 | 45 | 2008 |
Phenotypic and genomic comparison of Mycobacterium aurum and surrogate model species to Mycobacterium tuberculosis: implications for drug discovery A Namouchi, M Cimino, S Favre-Rochex, P Charles, B Gicquel BMC genomics 18, 1-9, 2017 | 44 | 2017 |
Evidence for the critical role of a secondary site rpoB mutation in the compensatory evolution and successful transmission of an MDR tuberculosis outbreak strain N Meftahi, A Namouchi, B Mhenni, G Brandis, D Hughes, H Mardassi Journal of Antimicrobial Chemotherapy 71 (2), 324-332, 2016 | 44 | 2016 |
Fluoroquinolone and pyrazinamide resistance in multidrug-resistant tuberculosis. C Pierre-Audigier, C Surcouf, V Cadet-Daniel, A Namouchi, S Heng, ... The international journal of tuberculosis and lung disease: the official …, 2012 | 35 | 2012 |
Genomic blueprint of a relapsing fever pathogen in 15th century Scandinavia M Guellil, O Kersten, A Namouchi, EL Bauer, M Derrick, AØ Jensen, ... Proceedings of the National Academy of Sciences 115 (41), 10422-10427, 2018 | 34 | 2018 |
Molecular detection of fluoroquinolone-resistance in multi-drug resistant tuberculosis in Cambodia suggests low association with XDR phenotypes C Surcouf, S Heng, C Pierre-Audigier, V Cadet-Daniel, A Namouchi, ... BMC infectious diseases 11, 1-8, 2011 | 29 | 2011 |
A pulmonary lactobacillus murinus strain induces Th17 and RORγt+ regulatory T cells and reduces lung inflammation in tuberculosis L Bernard-Raichon, A Colom, SC Monard, A Namouchi, M Cescato, ... The Journal of Immunology 207 (7), 1857-1870, 2021 | 27 | 2021 |
Evolution of smooth tubercle Bacilli PE and PE_PGRS genes: evidence for a prominent role of recombination and imprint of positive selection A Namouchi, A Karboul, M Fabre, MC Gutierrez, H Mardassi PLoS One 8 (5), e64718, 2013 | 27 | 2013 |
High throughput phenotypic selection of Mycobacterium tuberculosis mutants with impaired resistance to reactive oxygen species identifies genes important for intracellular growth O Mestre, R Hurtado-Ortiz, T Dos Vultos, A Namouchi, M Cimino, ... PLoS One 8 (1), e53486, 2013 | 25 | 2013 |
Deciphering the recent phylogenetic expansion of the originally deeply rooted Mycobacterium tuberculosis lineage 7 SA Yimer, A Namouchi, ED Zegeye, C Holm-Hansen, G Norheim, ... BMC Evolutionary Biology 16, 1-10, 2016 | 17 | 2016 |