| I-TASSER: a unified platform for automated protein structure and function prediction A Roy, A Kucukural, Y Zhang Nature protocols 5 (4), 725-738, 2010 | 7316 | 2010 |
| The I-TASSER Suite: protein structure and function prediction J Yang, R Yan, A Roy, D Xu, J Poisson, Y Zhang Nature methods 12 (1), 7-8, 2015 | 6076 | 2015 |
| Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment J Yang, A Roy, Y Zhang | 967 | 2013 |
| COFACTOR: an accurate comparative algorithm for structure-based protein function annotation A Roy, J Yang, Y Zhang Nucleic acids research 40 (W1), W471-W477, 2012 | 810 | 2012 |
| BioLiP: a semi-manually curated database for biologically relevant ligand–protein interactions J Yang, A Roy, Y Zhang Nucleic acids research 41 (D1), D1096-D1103, 2012 | 721 | 2012 |
| Automated protein structure modeling in CASP9 by I‐TASSER pipeline combined with QUARK‐based ab initio folding and FG‐MD‐based structure refinement D Xu, J Zhang, A Roy, Y Zhang Proteins: Structure, Function, and Bioinformatics 79 (S10), 147-160, 2011 | 178 | 2011 |
| Recognizing protein-ligand binding sites by global structural alignment and local geometry refinement A Roy, Y Zhang Structure 20 (6), 987-997, 2012 | 125 | 2012 |
| A protocol for computer-based protein structure and function prediction A Roy, D Xu, J Poisson, Y Zhang Journal of visualized experiments: JoVE, 2011 | 111 | 2011 |
| CANDO and the infinite drug discovery frontier M Minie, G Chopra, G Sethi, J Horst, G White, A Roy, K Hatti, R Samudrala Drug discovery today 19 (9), 1353-1363, 2014 | 74 | 2014 |
| Brain activity patterns in high-throughput electrophysiology screen predict both drug efficacies and side effects PM Eimon, M Ghannad-Rezaie, G De Rienzo, A Allalou, Y Wu, M Gao, ... Nature communications 9 (1), 219, 2018 | 71 | 2018 |
| LIGSIFT: an open-source tool for ligand structural alignment and virtual screening A Roy, J Skolnick Bioinformatics 31 (4), 539-544, 2014 | 58 | 2014 |
| Functional Implications of Structural Predictions for Alternative Splice Proteins Expressed in Her2/neu–Induced Breast Cancers R Menon, A Roy, S Mukerjee, S Belkin, Y Zhang, GS Omenn Journal of proteome research, 2011 | 48 | 2011 |
| Chemical space of Escherichia coli dihydrofolate reductase inhibitors: New approaches for discovering novel drugs for old bugs B Srinivasan*, S Tonddast‐Navaei, A Roy §, H Zhou, J Skolnick Medicinal research reviews 39 (2), 684-705, 2019 | 41 | 2019 |
| PoLi: A Virtual Screening Pipeline Based on Template Pocket and Ligand Similarity A Roy, B Srinivasan, J Skolnick Journal of chemical information and modeling 55 (8), 1757-1770, 2015 | 39 | 2015 |
| HAAD: a quick algorithm for accurate prediction of hydrogen atoms in protein structures Y Li, A Roy, Y Zhang PloS one 4 (8), e6701, 2009 | 37 | 2009 |
| Implications of the small number of distinct ligand binding pockets in proteins for drug discovery, evolution and biochemical function J Skolnick, M Gao, A Roy, B Srinivasan, H Zhou Bioorganic & medicinal chemistry letters 25 (6), 1163-1170, 2015 | 32 | 2015 |
| Parkin, a top level manager in the cell’s sanitation department CA Rankin, A Roy, Y Zhang, M Richter The open biochemistry journal 5, 9, 2011 | 28 | 2011 |
| QAUST: protein function prediction using structure similarity, protein interaction, and functional motifs FZ Smaili, S Tian, A Roy, M Alazmi, ST Arold, S Mukherjee, PS Hefty, ... Genomics, Proteomics and Bioinformatics 19 (6), 998-1011, 2021 | 21 | 2021 |
| The role of covalent dimerization on the physical and chemical stability of the EC1 domain of human E-cadherin M Trivedi, RA Davis, Y Shabaik, A Roy, G Verkhivker, JS Laurence, ... Journal of pharmaceutical sciences 98 (10), 3562-3574, 2009 | 19 | 2009 |
| Protein structure prediction A Roy, Y Zhang Encyclopeda of Life Sciences. John Wiley & Sons, Ltd, a0003031, 2012 | 18 | 2012 |
Yang ZhangNational University of Singapore在 nus.edu.sg 的电子邮件经过验证
