BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ... PLoS computational biology 15 (4), e1006650, 2019 | 3015 | 2019 |
Dsuite ‐ Fast D‐statistics and related admixture evidence from VCF files M Malinksy, M Matschiner, H Svardal Molecular Ecology Resources 21 (2), 584-595, 2020 | 491 | 2020 |
TANDEM: integrating automated allele binning into genetics and genomics workflows M Matschiner, W Salzburger Bioinformatics 25 (15), 1982-1983, 2009 | 359 | 2009 |
Evolution of the immune system influences speciation rates in teleost fishes M Malmstrøm, M Matschiner, OK Tørresen, B Star, LG Snipen, TF Hansen, ... Nature Genetics, 2016 | 233 | 2016 |
Drivers and dynamics of a massive adaptive radiation in cichlid fishes F Ronco, M Matschiner, A Böhne, A Boila, HH Büscher, A El Taher, ... Nature 589 (7840), 76-81, 2021 | 207 | 2021 |
Vision using multiple distinct rod opsins in deep-sea fishes Z Musilova, F Cortesi, M Matschiner, WIL Davies, JS Patel, SM Stieb, ... Science 364 (6440), 588-592, 2019 | 187 | 2019 |
Efficient ancestry and mutation simulation with msprime 1.0 F Baumdicker, G Bisschop, D Goldstein, G Gower, AP Ragsdale, ... Genetics 220 (3), iyab229, 2022 | 168 | 2022 |
The era of reference genomes in conservation genomics G Formenti, K Theissinger, C Fernandes, I Bista, A Bombarely, C Bleidorn, ... Trends in Ecology & Evolution 37 (3), 197-202, 2022 | 165 | 2022 |
Bayesian Divergence-Time Estimation with Genome-Wide Single-Nucleotide Polymorphism Data of Sea Catfishes (Ariidae) Supports Miocene Closure of the Panamanian Isthmus M Stange, MR Sánchez-Villagra, W Salzburger, M Matschiner Systematic biology 67 (4), 681-699, 2018 | 154* | 2018 |
On the origin and trigger of the notothenioid adaptive radiation M Matschiner, R Hanel, W Salzburger PLoS one 6 (4), e18911, 2011 | 150 | 2011 |
Disentangling incomplete lineage sorting and introgression to refine species-tree estimates for Lake Tanganyika cichlid fishes BS Meyer, M Matschiner, W Salzburger Systematic Biology, 2016 | 123 | 2016 |
Bayesian phylogenetic estimation of clade ages supports trans-Atlantic dispersal of cichlid fishes M Matschiner, Z Musilová, JMI Barth, Z Starostová, W Salzburger, M Steel, ... Systematic biology 66 (1), 3-22, 2017 | 115 | 2017 |
Gene flow by larval dispersal in the Antarctic notothenioid fish Gobionotothen gibberifrons M Matschiner, R Hanel, W Salzburger Molecular Ecology 18 (12), 2574-2587, 2009 | 103 | 2009 |
How genomics can help biodiversity conservation K Theissinger, C Fernandes, G Formenti, I Bista, PR Berg, C Bleidorn, ... Trends in Genetics, 2023 | 90 | 2023 |
Evolution of male pregnancy associated with remodeling of canonical vertebrate immunity in seahorses and pipefishes O Roth, MH Solbakken, OK Tørresen, T Bayer, M Matschiner, HT Baalsrud, ... Proceedings of the National Academy of Sciences, 2020 | 90 | 2020 |
Supergene origin and maintenance in Atlantic cod M Matschiner, JMI Barth, OK Tørresen, B Star, HT Baalsrud, MSO Brieuc, ... Nature Ecology & Evolution 6 (4), 469-481, 2022 | 87 | 2022 |
A tribal level phylogeny of Lake Tanganyika cichlid fishes based on a genomic multi-marker approach BS Meyer, M Matschiner, W Salzburger Molecular phylogenetics and evolution 83, 56-71, 2015 | 87 | 2015 |
Diversity and disparity through time in the adaptive radiation of Antarctic notothenioid fishes M Colombo, M Damerau, R Hanel, W Salzburger, M Matschiner Journal of evolutionary biology 28 (2), 376-394, 2015 | 81 | 2015 |
Parallel ecological diversification in Antarctic notothenioid fishes as evidence for adaptive radiation S Rutschmann, M Matschiner, M Damerau, M Muschick, MF Lehmann, ... Molecular ecology 20 (22), 4707-4721, 2011 | 80 | 2011 |
Genomic stability through time despite decades of exploitation in cod on both sides of the Atlantic ML Pinsky, AM Eikeset, C Helmerson, IR Bradbury, P Bentzen, C Morris, ... Proceedings of the National Academy of Sciences 118 (15), e2025453118, 2021 | 76 | 2021 |