Succinate is an inflammatory signal that induces IL-1β through HIF-1α GM Tannahill, AM Curtis, J Adamik, EM Palsson-McDermott, ... Nature 496 (7444), 238-242, 2013 | 3642 | 2013 |
Nomadic lifestyle of Lactobacillus plantarum revealed by comparative genomics of 54 strains isolated from different habitats ME Martino, JR Bayjanov, BE Caffrey, M Wels, P Joncour, S Hughes, ... Environmental microbiology 18 (12), 4974-4989, 2016 | 226 | 2016 |
Cell-cycle proteins control production of neutrophil extracellular traps B Amulic, SL Knackstedt, UA Abed, N Deigendesch, CJ Harbort, ... Developmental cell 43 (4), 449-462. e5, 2017 | 200 | 2017 |
The long noncoding RNA CHROME regulates cholesterol homeostasis in primates EJ Hennessy, C van Solingen, KR Scacalossi, M Ouimet, MS Afonso, ... Nature metabolism 1 (1), 98-110, 2019 | 123 | 2019 |
Prediction of human population responses to toxic compounds by a collaborative competition F Eduati, LM Mangravite, T Wang, H Tang, JC Bare, R Huang, T Norman, ... Nature biotechnology 33 (9), 933-940, 2015 | 120 | 2015 |
The role of Ets2 transcription factor in the induction of microRNA-155 (miR-155) by lipopolysaccharide and its targeting by interleukin-10 SR Quinn, NE Mangan, BE Caffrey, MP Gantier, BRG Williams, ... Journal of Biological Chemistry 289 (7), 4316-4325, 2014 | 115 | 2014 |
PFAAT version 2.0: a tool for editing, annotating, and analyzing multiple sequence alignments DR Caffrey, PH Dana, V Mathur, M Ocano, EJ Hong, YE Wang, ... BMC bioinformatics 8, 1-7, 2007 | 70 | 2007 |
Identification of 170 New Long Noncoding RNAs in Schistosoma mansoni VF Oliveira, LAG Moares, EA Mota, LK Jannotti-Passos, PMZ Coelho, ... BioMed research international 2018 (1), 1264697, 2018 | 28 | 2018 |
Proteome-wide analysis of functional divergence in bacteria: exploring a host of ecological adaptations BE Caffrey, TA Williams, X Jiang, C Toft, K Hokamp, MA Fares PloS one 7 (4), e35659, 2012 | 20 | 2012 |
Genome-wide Chromatin Profiling of Legionella pneumophila–Infected Human Macrophages Reveals Activation of the Probacterial Host Factor TNFAIP2 I Du Bois, A Marsico, W Bertrams, MR Schweiger, BE Caffrey, ... The Journal of infectious diseases 214 (3), 454-463, 2016 | 17 | 2016 |
Nuclear factor κB2 p52 protein has a role in antiviral immunity through IκB kinase ϵ-dependent induction of Sp1 protein and interleukin 15 SL Doyle, KA Shirey, AF McGettrick, EF Kenny, S Carpenter, BE Caffrey, ... Journal of Biological Chemistry 288 (35), 25066-25075, 2013 | 17 | 2013 |
Linker histone H1. 2 and H1. 4 affect the neutrophil lineage determination G Sollberger, R Streeck, F Apel, BE Caffrey, AI Skoultchi, A Zychlinsky Elife 9, e52563, 2020 | 16 | 2020 |
A MicroRNA Network Controls Legionella pneumophila Replication in Human Macrophages via LGALS8 and MX1 CE Herkt, BE Caffrey, K Surmann, S Blankenburg, M Gesell Salazar, ... MBio 11 (2), 10.1128/mbio. 03155-19, 2020 | 15 | 2020 |
Functional conservation of an ancestral Pellino protein in helminth species CD Cluxton, BE Caffrey, GK Kinsella, PN Moynagh, MA Fares, PG Fallon Scientific Reports 5 (1), 11687, 2015 | 6 | 2015 |
Screening for eukaryotic motifs in Legionella pneumophila reveals Smh1 as bacterial deacetylase of host histones SM Herbel, L Moyon, M Christ, EM Elsayed, BE Caffrey, S Malmsheimer, ... Virulence 13 (1), 2042-2058, 2022 | 1 | 2022 |
Linker Histone H1 subtypes specifically regulate neutrophil differentiation G Sollberger, R Streeck, BE Caffrey, AI Skoultchi, A Zychlinsky bioRxiv, 763482, 2019 | 1 | 2019 |
Computational modeling of miRNA biogenesis B Caffrey, A Marsico Mathematical Models in Biology: Bringing Mathematics to Life, 85-98, 2015 | 1 | 2015 |
Phylogenomic inference of functional divergence TA Williams, BE Caffrey, X Jiang, C Toft, MA Fares BMC Bioinformatics 10, 1-2, 2009 | 1 | 2009 |
A microRNA network controls Legionella pneumophila replication in human macrophages via LGALS8 and MX1. mBio 11: e03155-19 CE Herkt, BE Caffrey, K Surmann, S Blankenburg, M Gesell Salazar, ... | | 2020 |
Research Article Identification of 170 New Long Noncoding RNAs in Schistosoma mansoni VF Oliveira, LAG Moares, EA Mota, LK Jannotti-Passos, PMZ Coelho, ... | | 2018 |