Singularity: Scientific containers for mobility of compute GM Kurtzer, V Sochat, MW Bauer PloS one 12 (5), e0177459, 2017 | 1613 | 2017 |
The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments KJ Gorgolewski, T Auer, VD Calhoun, RC Craddock, S Das, EP Duff, ... Scientific data 3 (1), 1-9, 2016 | 1454 | 2016 |
Sustainable data analysis with Snakemake F Mölder, KP Jablonski, B Letcher, MB Hall, CH Tomkins-Tinch, V Sochat, ... F1000Research 10, 2021 | 1023 | 2021 |
NeuroVault. org: a web-based repository for collecting and sharing unthresholded statistical maps of the human brain KJ Gorgolewski, G Varoquaux, G Rivera, Y Schwarz, SS Ghosh, ... Frontiers in neuroinformatics 9, 8, 2015 | 621 | 2015 |
Long-term neural and physiological phenotyping of a single human RA Poldrack, TO Laumann, O Koyejo, B Gregory, A Hover, MY Chen, ... Nature communications 6 (1), 8885, 2015 | 447 | 2015 |
Searching for a minimal set of behaviors for autism detection through feature selection-based machine learning JA Kosmicki, V Sochat, M Duda, DP Wall Translational psychiatry 5 (2), e514-e514, 2015 | 264 | 2015 |
DataLad: distributed system for joint management of code, data, and their relationship Y Halchenko, K Meyer, B Poldrack, D Solanky, A Wagner, J Gors, ... Journal of Open Source Software 6 (63), 2021 | 111 | 2021 |
FAIR principles for research software (FAIR4RS principles) NP Chue Hong, DS Katz, M Barker, AL Lamprecht, C Martinez, ... Zenodo, 2022 | 99 | 2022 |
NeuroVault. org: A repository for sharing unthresholded statistical maps, parcellations, and atlases of the human brain KJ Gorgolewski, G Varoquaux, G Rivera, Y Schwartz, VV Sochat, ... Neuroimage 124, 1242-1244, 2016 | 89 | 2016 |
Ten simple rules for writing Dockerfiles for reproducible data science D Nüst, V Sochat, B Marwick, SJ Eglen, T Head, T Hirst, BD Evans PLoS computational biology 16 (11), e1008316, 2020 | 77 | 2020 |
Sharing brain mapping statistical results with the neuroimaging data model C Maumet, T Auer, A Bowring, G Chen, S Das, G Flandin, S Ghosh, ... Scientific data 3 (1), 1-15, 2016 | 74 | 2016 |
Power and sample size calculations for fMRI studies based on the prevalence of active peaks J Durnez, J Degryse, B Moerkerke, R Seurinck, V Sochat, RA Poldrack, ... BioRxiv, 049429, 2016 | 65 | 2016 |
The experiment factory: Standardizing behavioral experiments VV Sochat, IW Eisenberg, AZ Enkavi, J Li, PG Bissett, RA Poldrack Frontiers in psychology 7, 610, 2016 | 60 | 2016 |
Enhancing reproducibility in scientific computing: Metrics and registry for Singularity containers VV Sochat, CJ Prybol, GM Kurtzer PloS one 12 (11), e0188511, 2017 | 55 | 2017 |
Sustainable data analysis with Snakemake. F1000Res 10: 33 F Mölder, KP Jablonski, B Letcher, MB Hall, CH Tomkins-Tinch, V Sochat, ... | 53 | 2021 |
A robust classifier to distinguish noise from fMRI independent components V Sochat, K Supekar, J Bustillo, V Calhoun, JA Turner, DL Rubin PLoS One 9 (4), e95493, 2014 | 32 | 2014 |
The experiment factory: Reproducible experiment containers V Sochat Journal of Open Source Software 3 (22), 521, 2018 | 25 | 2018 |
Power and sample size calculations for fMRI studies based on the prevalence of active peaks. bioRxiv, 049429 J Durnez, J Degryse, B Moerkerke, R Seurinck, V Sochat, R Poldrack, ... | 23 | 2016 |
Global analysis of the yeast knockout phenome G Turco, C Chang, RY Wang, G Kim, EH Stoops, B Richardson, V Sochat, ... Science Advances 9 (21), eadg5702, 2023 | 14 | 2023 |
Containershare: Open Source Registry to build, test, deploy with CircleCI V Sochat Journal of Open Source Software 3 (28), 878, 2018 | 13 | 2018 |