Improving prediction of secondary structure, local backbone angles, and solvent accessible surface area of proteins by iterative deep learning R Heffernan, K Paliwal, J Lyons, A Dehzangi, A Sharma, J Wang, A Sattar, ... Scientific reports 5, 2015 | 394 | 2015 |
Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou׳ s general PseAAC A Dehzangi, R Heffernan, A Sharma, J Lyons, K Paliwal, A Sattar Journal of theoretical biology 364, 284-294, 2015 | 258 | 2015 |
DeepInsight: A methodology to transform a non-image data to an image for convolution neural network architecture A Sharma, E Vans, D Shigemizu, KA Boroevich, T Tsunoda Scientific reports 9 (1), 11399, 2019 | 252 | 2019 |
Fast principal component analysis using fixed-point algorithm A Sharma, KK Paliwal Pattern Recognition Letters 28 (10), 1151-1155, 2007 | 242 | 2007 |
A top-r feature selection algorithm for microarray gene expression data A Sharma, S Imoto, S Miyano IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (3), 754-764, 2012 | 234 | 2012 |
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ... Nature Communications 10 (2674), 1-17, 2019 | 225 | 2019 |
Linear discriminant analysis for the small sample size problem: an overview A Sharma, KK Paliwal International Journal of Machine Learning and Cybernetics 6 (3), 443-454, 2015 | 179 | 2015 |
Predicting backbone Cα angles and dihedrals from protein sequences by stacked sparse auto‐encoder deep neural network J Lyons, A Dehzangi, R Heffernan, A Sharma, K Paliwal, A Sattar, Y Zhou, ... Journal of computational chemistry 35 (28), 2040-2046, 2014 | 176 | 2014 |
A feature extraction technique using bi-gram probabilities of position specific scoring matrix for protein fold recognition A Sharma, J Lyons, A Dehzangi, KK Paliwal Journal of theoretical biology 320, 41-46, 2013 | 171 | 2013 |
SPIDER2: A Package to Predict Secondary Structure, Accessible Surface Area, and Main-Chain Torsional Angles by Deep Neural Networks Y Yang, R Heffernan, JL K. Paliwal, A Dehzangi, A Sharma, J Wang, ... Predicting Protein Secondary Structure 1484, 2017 | 164 | 2017 |
Critical assessment of protein intrinsic disorder prediction M Necci, D Piovesan, C Predictors, MT Hoque, I Walsh, S Iqbal, ... Nature Methods, 1-14, 2021 | 145 | 2021 |
A deep learning approach for motor imagery EEG signal classification S Kumar, A Sharma, K Mamun, T Tsunoda 2016 3rd Asia-Pacific World Congress on Computer Science and Engineering …, 2016 | 127 | 2016 |
An improved discriminative filter bank selection approach for motor imagery EEG signal classification using mutual information S Kumar, A Sharma, T Tatsuhiko BMC Bioinformatics 18 (Suppl 16), 545, 2017 | 117 | 2017 |
Brain wave classification using long short-term memory network based OPTICAL predictor S Kumar, A Sharma, T Tsunoda Scientific Reports 9 (1), 1-13, 2019 | 113 | 2019 |
Intrusion detection using text processing techniques with a kernel based similarity measure A Sharma, AK Pujari, KK Paliwal computers & security 26 (7-8), 488-495, 2007 | 104 | 2007 |
Highly Accurate Sequence-based Prediction of Half-Sphere Exposures of Amino Acid Residues in Proteins R Heffernan, A Dehzangi, J Lyons, K Paliwal, A Sharma, J Wang, A Sattar, ... Bioinformatics 32 (6), 843-849, 2016 | 102 | 2016 |
Cancer classification by gradient LDA technique using microarray gene expression data A Sharma, KK Paliwal Data & Knowledge Engineering 66 (2), 338-347, 2008 | 100 | 2008 |
PyFeat: A Python-based Effective Feature Generation Tool for DNA, RNA, and Protein Sequences R Muhammod, S Ahmed, DM Farid, S Shatabda, A Sharma, A Dehzangi Bioinformatics 165, 1-2, 2019 | 93 | 2019 |
Predict Gram-positive and Gram-negative subcellular localization via incorporating evolutionary information and physicochemical features into Chou’s general PseAAC R Sharma, A Dehzangi, J Lyons, K Paliwal, T Tsunoda, A Sharma IEEE Transactions on NanoBioscience 14 (8), 915-926, 2015 | 88 | 2015 |
Principal component analysis using QR decomposition A Sharma, KK Paliwal, S Imoto, S Miyano International Journal of Machine Learning and Cybernetics 4 (6), 679-683, 2013 | 84 | 2013 |