Potential RNA-dependent RNA polymerase inhibitors as prospective therapeutics against SARS-CoV-2 R Pokhrel, P Chapagain, J Siltberg-Liberles Journal of medical microbiology 69 (6), 864-873, 2020 | 63 | 2020 |
Molecular mechanisms of pore formation and membrane disruption by the antimicrobial lantibiotic peptide Mutacin 1140 R Pokhrel, N Bhattarai, P Baral, BS Gerstman, JH Park, M Handfield, ... Physical Chemistry Chemical Physics 21 (23), 12530-12539, 2019 | 41 | 2019 |
Medulloblastoma cerebrospinal fluid reveals metabolites and lipids indicative of hypoxia and cancer-specific RNAs B Lee, I Mahmud, R Pokhrel, R Murad, M Yuan, S Stapleton, ... Acta neuropathologica communications 10 (1), 25, 2022 | 33 | 2022 |
Measles and Nipah virus assembly: Specific lipid binding drives matrix polymerization MJ Norris, ML Husby, WB Kiosses, J Yin, R Saxena, LJ Rennick, A Heiner, ... Science advances 8 (29), eabn1440, 2022 | 23 | 2022 |
Membrane pore formation and ion selectivity of the Ebola virus delta peptide R Pokhrel, E Pavadai, BS Gerstman, PP Chapagain Physical Chemistry Chemical Physics 21 (10), 5578-5585, 2019 | 21 | 2019 |
Molecular Modeling and Simulation of the Peptidoglycan Layer of Gram-Positive Bacteria Staphylococcus aureus R Pokhrel, R Shakya, P Baral, P Chapagain Journal of Chemical Information and Modeling 62 (20), 4955-4962, 2022 | 20 | 2022 |
Graphene-VP40 interactions and potential disruption of the Ebola virus matrix filaments R Pokhrel, N Bhattarai, KA Johnson, BS Gerstman, RV Stahelin, ... Biochemical and biophysical research communications 493 (1), 176-181, 2017 | 20 | 2017 |
Domain rearrangement and denaturation in Ebola virus protein VP40 R Pokhrel, P Sompornpisut, P Chapagain, B Olson, B Gerstman, ... AIP Advances 8 (12), 2018 | 12 | 2018 |
In silico investigations of calcium phosphate mineralization in extracellular vesicles R Pokhrel, BS Gerstman, JD Hutcheson, PP Chapagain The Journal of Physical Chemistry B 122 (14), 3782-3789, 2018 | 12 | 2018 |
A conserved tryptophan in the Ebola virus matrix protein C-terminal domain is required for efficient virus-like particle formation KA Johnson, R Pokhrel, MR Budicini, BS Gerstman, PP Chapagain, ... Pathogens 9 (5), 402, 2020 | 10 | 2020 |
Lipid II binding and transmembrane properties of various antimicrobial lanthipeptides R Pokhrel, N Bhattarai, P Baral, BS Gerstman, JH Park, M Handfield, ... Journal of Chemical Theory and Computation 18 (1), 516-525, 2021 | 9 | 2021 |
The long non-coding RNA SPRIGHTLY and its binding partner PTBP1 regulate exon 5 skipping of SMYD3 transcripts in group 4 medulloblastomas B Lee, K Katsushima, R Pokhrel, M Yuan, S Stapleton, G Jallo, ... Neuro-Oncology Advances 4 (1), vdac120, 2022 | 6 | 2022 |
Structural insights into the repair mechanism of AGT for methyl-induced DNA damage RP Koirala, R Pokhrel, P Baral, PB Tiwari, PP Chapagain, NP Adhikari Biological Chemistry 402 (10), 1203-1211, 2021 | 6 | 2021 |
Ebola virus protein VP40 binding to Sec24c for transport to the plasma membrane N Bhattarai, E Pavadai, R Pokhrel, P Baral, ML Hossen, RV Stahelin, ... Proteins: Structure, Function, and Bioinformatics 90 (2), 340-350, 2022 | 5 | 2022 |
The oncogenic circular RNA circ_63706 is a potential therapeutic target in sonic hedgehog-subtype childhood medulloblastomas K Katsushima, R Pokhrel, I Mahmud, M Yuan, R Murad, P Baral, R Zhou, ... Acta Neuropathologica Communications 11 (1), 38, 2023 | 4 | 2023 |
Potential disruption of Ebola virus matrix by graphene nano-sheets R Pokhrel, GC Jeevan, N Bhattarai, P Chapagain, B Gerstman Biophysical Journal 114 (3), 218a, 2018 | 2 | 2018 |
miRNA-211 maintains metabolic homeostasis in medulloblastoma through its target gene long-chain acyl-CoA synthetase 4 M Yuan, I Mahmud, K Katsushima, K Joshi, O Saulnier, R Pokhrel, B Lee, ... Acta Neuropathologica Communications 11 (1), 203, 2023 | 1 | 2023 |
Immunoinformatic screening of Marburgvirus epitopes and computational investigations of epitope-allele complexes P Baral, E Pavadai, Z Zhou, Y Xu, CK Tison, R Pokhrel, BS Gerstman, ... International Immunopharmacology 111, 109109, 2022 | 1 | 2022 |
Investigations of Cell-Penetrating and Membrane-Pore Forming Peptides R Pokhrel | 1 | 2020 |
E3 ubiquitin-protein ligase, tetratricopeptide repeat domain 3 (TTC3), H4 clustered histone 5 (H4C5), and epithelial cell adhesion molecule (EpCAM) are novel urine-enriched … RJ Perera, M Moschovas, R Perera, B Lee, A Miller, EK Amankwah, ... Cancer Research 83 (7_Supplement), 6507-6507, 2023 | | 2023 |