Prediction of protein-protein interactions from amino acid sequences with ensemble extreme learning machines and principal component analysis ZH You, YK Lei, L Zhu, J Xia, B Wang BMC bioinformatics 14 (S8), S10, 2013 | 298 | 2013 |
BRAF L597 mutations in melanoma are associated with sensitivity to MEK inhibitors KB Dahlman, J Xia, K Hutchinson, C Ng, D Hucks, P Jia, M Atefi, Z Su, ... Cancer Discovery 2 (9), 791-797, 2012 | 223* | 2012 |
APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility JF Xia, XM Zhao, J Song, DS Huang BMC bioinformatics 11 (1), 174, 2010 | 211 | 2010 |
Sequence-based prediction of protein-protein interactions by means of rotation forest and autocorrelation descriptor JF Xia, K Han, DS Huang Protein and Peptide Letters 17 (1), 137-145, 2010 | 156 | 2010 |
Prediction of Protein-Protein Interactions from Protein Sequence Using Local Descriptors L Yang, JF Xia, J Gui Protein and Peptide Letters 17 (9), 1085-1090, 2010 | 155 | 2010 |
Automatic classification for field crop insects via multiple-task sparse representation and multiple-kernel learning C Xie, J Zhang, R Li, J Li, P Hong, J Xia, P Chen Computers and Electronics in Agriculture 119, 123-132, 2015 | 125 | 2015 |
Application of next generation sequencing to human gene fusion detection: computational tools, features and perspectives Q Wang, J Xia, P Jia, W Pao, Z Zhao Briefings in Bioinformatics, 2012 | 116 | 2012 |
A meta-analysis of somatic mutations from next generation sequencing of 241 melanomas: a road map for the study of genes with potential clinical relevance J Xia, P Jia, KE Hutchinson, KB Dahlman, D Johnson, J Sosman, W Pao, ... Molecular cancer therapeutics 13 (7), 1918-1928, 2014 | 108 | 2014 |
MET exon 14 skipping in non-small cell lung cancer RS Heist, HS Shim, S Gingipally, M Mino-Kenudson, L Le, JF Gainor, ... The oncologist 21 (4), 481, 2016 | 106 | 2016 |
Predicting protein–protein interactions from protein sequences using meta predictor JF Xia, XM Zhao, DS Huang Amino acids 39 (5), 1595-1599, 2010 | 89 | 2010 |
Predicting protein–protein interactions from sequence using correlation coefficient and high-quality interaction dataset MG Shi, JF Xia, XL Li, DS Huang Amino acids 38 (3), 891-899, 2010 | 88 | 2010 |
Investigating the relationship of DNA methylation with mutation rate and allele frequency in the human genome J Xia, L Han, Z Zhao BMC Genomics 13 (Suppl 8), S7, 2012 | 85 | 2012 |
Next-generation sequencing of paired tyrosine kinase inhibitor-sensitive and-resistant EGFR mutant lung cancer cell lines identifies spectrum of DNA changes associated with … P Jia, H Jin, CB Meador, J Xia, K Ohashi, L Liu, V Pirazzoli, KB Dahlman, ... Genome research 23 (9), 1434-1445, 2013 | 62 | 2013 |
Functional complementation between transcriptional methylation regulation and post-transcriptional microRNA regulation in the human genome Z Su, J Xia, Z Zhao BMC Genomics 12 (Suppl 5), S15, 2011 | 61 | 2011 |
Comparison and integration of computational methods for deleterious synonymous mutation prediction N Cheng, M Li, L Zhao, B Zhang, Y Yang, CH Zheng, J Xia Briefings in Bioinformatics 21 (3), 970-981, 2020 | 47 | 2020 |
Do cancer proteins really interact strongly in the human protein–protein interaction network? J Xia, J Sun, P Jia, Z Zhao Computational biology and chemistry 35 (3), 121-125, 2011 | 45 | 2011 |
Prediction of circRNA-disease associations based on inductive matrix completion M Li, M Liu, Y Bin, J Xia BMC medical genomics 13 (5), 1-13, 2020 | 41 | 2020 |
Inconsistency and features of single nucleotide variants detected in whole exome sequencing versus transcriptome sequencing: A case study in lung cancer TD O’Brien, P Jia, J Xia, U Saxena, H Jin, H Vuong, P Kim, Q Wang, ... Methods 83, 118-127, 2015 | 39 | 2015 |
Computational identification of deleterious synonymous variants in human genomes using a feature-based approach F Shi, Y Yao, Y Bin, CH Zheng, J Xia BMC medical genomics 12 (1), 81-88, 2019 | 37 | 2019 |
NGS catalog: A database of next generation sequencing studies in humans J Xia, Q Wang, P Jia, B Wang, W Pao, Z Zhao Human Mutation 33 (6), E2341-E2355, 2012 | 37 | 2012 |