The Gene Ontology Resource: 20 years and still GOing strong. TGO Consortium Nucleic Acids Research 47 (D1), D330–D338, 2018 | 3708* | 2018 |
The Gene Ontology resource: enriching a GOld mine Nucleic acids research 49 (D1), D325-D334, 2021 | 2736 | 2021 |
The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases S Orchard, M Ammari, B Aranda, L Breuza, L Briganti, F Broackes-Carter, ... Nucleic acids research 42 (D1), D358-D363, 2014 | 1878 | 2014 |
Expansion of the Gene Ontology knowledgebase and resources Gene Ontology Consortium Nucleic acids research 45 (D1), D331-D338, 2017 | 1770* | 2017 |
The IntAct molecular interaction database in 2012 S Kerrien, B Aranda, L Breuza, A Bridge, F Broackes-Carter, C Chen, ... Nucleic acids research 40 (D1), D841-D846, 2012 | 1272 | 2012 |
HIPPIE: Integrating protein interaction networks with experiment based quality scores MH Schaefer, JF Fontaine, A Vinayagam, P Porras, EE Wanker, ... PloS one 7 (2), e31826, 2012 | 400 | 2012 |
Non-coding RNA regulatory networks S Panni, RC Lovering, P Porras, S Orchard Biochimica et biophysica acta (BBA)-Gene regulatory mechanisms 1863 (6), 194417, 2020 | 378 | 2020 |
Analyzing protein–protein interaction networks GCKW Koh, P Porras, B Aranda, H Hermjakob, SE Orchard Journal of proteome research 11 (4), 2014-2031, 2012 | 204 | 2012 |
RNAcentral 2021: secondary structure integration, improved sequence search and new member databases Nucleic acids research 49 (D1), D212-D220, 2021 | 189 | 2021 |
The IntAct database: efficient access to fine-grained molecular interaction data N Del Toro, A Shrivastava, E Ragueneau, B Meldal, C Combe, E Barrera, ... Nucleic acids research 50 (D1), D648-D653, 2022 | 161 | 2022 |
Detection of alpha-rod protein repeats using a neural network and application to huntingtin GA Palidwor, S Shcherbinin, MR Huska, T Rasko, U Stelzl, A Arumughan, ... PLoS computational biology 5 (3), e1000304, 2009 | 114 | 2009 |
Complex Portal 2018: extended content and enhanced visualization tools for macromolecular complexes BHM Meldal, H Bye-A-Jee, L Gajdoš, Z Hammerová, A Horáčková, ... Nucleic Acids Research, 2018 | 98 | 2018 |
Two isoforms of Saccharomyces cerevisiae glutaredoxin 2 are expressed in vivo and localize to different subcellular compartments JR Pedrajas, P Porras, E Martínez-Galisteo, CA Padilla, ... Biochemical journal 364 (3), 617-623, 2002 | 96 | 2002 |
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ... Molecular systems biology 17 (10), e10387, 2021 | 87 | 2021 |
Structural Aspects of the Distinct Biochemical Properties of Glutaredoxin 1 and Glutaredoxin 2 from Saccharomyces cerevisiae KF Discola, MA de Oliveira, JRR Cussiol, G Monteiro, JA Bárcena, ... Journal of molecular biology 385 (3), 889-901, 2009 | 87 | 2009 |
Interactome mapping provides a network of neurodegenerative disease proteins and uncovers widespread protein aggregation in affected brains C Haenig, N Atias, AK Taylor, A Mazza, MH Schaefer, J Russ, ... Cell reports 32 (7), 2020 | 80 | 2020 |
One single in-frame AUG codon is responsible for a diversity of subcellular localizations of glutaredoxin 2 in Saccharomyces cerevisiae P Porras, CA Padilla, M Krayl, W Voos, JA Bárcena Journal of Biological Chemistry 281 (24), 16551-16562, 2006 | 78 | 2006 |
Glutaredoxins catalyze the reduction of glutathione by dihydrolipoamide with high efficiency P Porras, JR Pedrajas, E Martı́nez-Galisteo, CA Padilla, C Johansson, ... Biochemical and biophysical research communications 295 (5), 1046-1051, 2002 | 69 | 2002 |
Merging and scoring molecular interactions utilising existing community standards: tools, use-cases and a case study JM Villaveces, RC Jimenez, P Porras, N del-Toro, M Duesbury, ... Database 2015, bau131, 2015 | 66 | 2015 |
Dynamic circadian protein–protein interaction networks predict temporal organization of cellular functions T Wallach, K Schellenberg, B Maier, RKR Kalathur, P Porras, EE Wanker, ... PLoS genetics 9 (3), e1003398, 2013 | 65 | 2013 |