DNA methylation protects hematopoietic stem cell multipotency from myeloerythroid restriction AM Bröske, L Vockentanz, S Kharazi, MR Huska, E Mancini, M Scheller, ... Nature genetics 41 (11), 1207-1215, 2009 | 524 | 2009 |
Genomic basis for RNA alterations in cancer PCAWG Transcriptome Core Group Calabrese Claudia 2 Davidson Natalie R. 3 4 5 ... Nature 578 (7793), 129-136, 2020 | 284 | 2020 |
PROmiRNA: a new miRNA promoter recognition method uncovers the complex regulation of intronic miRNAs A Marsico, MR Huska, J Lasserre, H Hu, D Vucicevic, A Musahl, UA Orom, ... Genome biology 14, 1-23, 2013 | 139 | 2013 |
MedlineRanker: flexible ranking of biomedical literature JF Fontaine, A Barbosa-Silva, M Schaefer, MR Huska, EM Muro, ... Nucleic acids research 37 (suppl_2), W141-W146, 2009 | 136 | 2009 |
Prediction of human population responses to toxic compounds by a collaborative competition F Eduati, LM Mangravite, T Wang, H Tang, JC Bare, R Huang, T Norman, ... Nature biotechnology 33 (9), 933-940, 2015 | 120 | 2015 |
Detection of alpha-rod protein repeats using a neural network and application to huntingtin GA Palidwor, S Shcherbinin, MR Huska, T Rasko, U Stelzl, A Arumughan, ... PLoS computational biology 5 (3), e1000304, 2009 | 114 | 2009 |
Study of stem cell function using microarray experiments C Perez-Iratxeta, G Palidwor, CJ Porter, NA Sanche, MR Huska, ... FEBS letters 579 (8), 1795-1801, 2005 | 96 | 2005 |
SPON2, a newly identified target gene of MACC1, drives colorectal cancer metastasis in mice and is prognostic for colorectal cancer patient survival F Schmid, Q Wang, MR Huska, MA Andrade-Navarro, M Lemm, I Fichtner, ... Oncogene 35 (46), 5942-5952, 2016 | 81 | 2016 |
Role of the chromatin landscape and sequence in determining cell type-specific genomic glucocorticoid receptor binding and gene regulation MI Love, MR Huska, M Jurk, R Schöpflin, SR Starick, K Schwahn, ... Nucleic acids research 45 (4), 1805-1819, 2017 | 57 | 2017 |
Concerted down-regulation of immune-system related genes predicts metastasis in colorectal carcinoma M Fehlker, MR Huska, T Jöns, MA Andrade-Navarro, W Kemmner BMC cancer 14, 1-12, 2014 | 27 | 2014 |
The soluble intracellular domain of megalin does not affect renal proximal tubular function in vivo A Christ, S Terryn, V Schmidt, EI Christensen, MR Huska, ... Kidney international 78 (5), 473-477, 2010 | 27 | 2010 |
Recent developments in StemBase: a tool to study gene expression in human and murine stem cells R Sandie, GA Palidwor, MR Huska, CJ Porter, PM Krzyzanowski, ... BMC research notes 2, 1-6, 2009 | 22 | 2009 |
BiasViz: visualization of amino acid biased regions in protein alignments MR Huska, H Buschmann, MA Andrade-Navarro Bioinformatics 23 (22), 3093-3094, 2007 | 12 | 2007 |
Improved prediction of non-methylated islands in vertebrates highlights different characteristic sequence patterns M Huska, M Vingron PLOS Computational Biology 12 (12), e1005249, 2016 | 9 | 2016 |
The anti-amyloid compound DO1 decreases plaque pathology and neuroinflammation-related expression changes in 5xFAD transgenic mice A Boeddrich, JT Babila, T Wiglenda, L Diez, M Jacob, W Nietfeld, ... Cell chemical biology 26 (1), 109-120. e7, 2019 | 8 | 2019 |
RNA sequencing of human peripheral blood cells indicates upregulation of immune-related genes in Huntington's disease MA Andrade-Navarro, K Mühlenberg, EJ Spruth, N Mah, ... Frontiers in Neurology 11, 573560, 2020 | 7 | 2020 |
Predicting enhancers using a small subset of high confidence examples and co-training MR Huska, A Ramisch, M Vingron, A Marsico PeerJ Preprints, 2016 | 5 | 2016 |
Refphase: Multi-sample phasing reveals haplotype-specific copy number heterogeneity TBK Watkins, EC Colliver, MR Huska, TL Kaufmann, EL Lim, CB Duncan, ... PLoS computational biology 19 (10), e1011379, 2023 | 4 | 2023 |
S100P, a target gene of MACC1, contributes to colorectal cancer metastasis. F Schmid, Q Wang, MR Huska, MA Andrade-Navarro, M Lemm, I Fichtner, ... Cancer Research 73 (8_Supplement), 416-416, 2013 | 4 | 2013 |
211 SPON2, a newly identified transcriptional target gene of MACC1, is associated with colorectal cancer metastasis F Schmid, Q Wang, M Huska, M Andrade, I Fichtner, PM Schlag, U Stein European Journal of Cancer, 63-64, 2012 | 3 | 2012 |