HiRIEF LC-MS enables deep proteome coverage and unbiased proteogenomics RMM Branca, LM Orre, HJ Johansson, V Granholm, M Huss, ... Nature methods 11 (1), 59-62, 2014 | 282 | 2014 |
Synaptic markers of cognitive decline in neurodegenerative diseases: a proteomic approach E Bereczki, RM Branca, PT Francis, JB Pereira, JH Baek, T Hortobágyi, ... Brain 141 (2), 582-595, 2018 | 206 | 2018 |
Breast cancer quantitative proteome and proteogenomic landscape HJ Johansson, F Socciarelli, NM Vacanti, MH Haugen, Y Zhu, I Siavelis, ... Nature communications 10 (1), 1600, 2019 | 180 | 2019 |
Discovery of coding regions in the human genome by integrated proteogenomics analysis workflow Y Zhu, LM Orre, HJ Johansson, M Huss, J Boekel, M Vesterlund, ... Nature communications 9 (1), 903, 2018 | 152 | 2018 |
Mammalian target of rapamycin (mTor) mediates tau protein dyshomeostasis: implication for Alzheimer disease Z Tang, E Bereczki, H Zhang, S Wang, C Li, X Ji, RM Branca, J Lehtiö, ... Journal of Biological Chemistry 288 (22), 15556-15570, 2013 | 150 | 2013 |
Quantitative accuracy in mass spectrometry based proteomics of complex samples: the impact of labeling and precursor interference AS Sandberg, RMM Branca, J Lehtiö, J Forshed Journal of proteomics 96, 133-144, 2014 | 109 | 2014 |
Tumor proteomics by multivariate analysis on individual pathway data for characterization of vulvar cancer phenotypes AS Sandberg, G Lindell, BN Källström, RM Branca, KG Danielsson, ... Molecular & Cellular Proteomics 11 (7), M112. 016998-1-M112. 016998-14, 2012 | 100 | 2012 |
Proteomic screen reveals Fbw7 as a modulator of the NF-κB pathway A Arabi, K Ullah, RMM Branca, J Johansson, D Bandarra, M Haneklaus, ... Nature communications 3 (1), 976, 2012 | 96 | 2012 |
Defining, comparing, and improving iTRAQ quantification in mass spectrometry proteomics data L Hultin-Rosenberg, J Forshed, RMM Branca, J Lehtiö, HJ Johansson Molecular & Cellular Proteomics 12 (7), 2021-2031, 2013 | 72 | 2013 |
A combined proteomic and transcriptomic approach shows diverging molecular mechanisms in thoracic aortic aneurysm development in patients with tricuspid-and bicuspid aortic valve S Kjellqvist, S Maleki, T Olsson, M Chwastyniak, RMM Branca, J Lehtiö, ... Molecular & Cellular Proteomics 12 (2), 407-425, 2013 | 68 | 2013 |
Quantitative proteomics profiling of primary lung adenocarcinoma tumors reveals functional perturbations in tumor metabolism M Pernemalm, L De Petris, RM Branca, J Forshed, L Kanter, JC Soria, ... Journal of proteome research 12 (9), 3934-3943, 2013 | 67 | 2013 |
Organellar oligopeptidase (OOP) provides a complementary pathway for targeting peptide degradation in mitochondria and chloroplasts B Kmiec, PF Teixeira, RPA Berntsson, MW Murcha, RMM Branca, ... Proceedings of the National Academy of Sciences 110 (40), E3761-E3769, 2013 | 64 | 2013 |
Direct observation of structurally encoded metal discrimination and ether bond formation in a heterodinuclear metalloprotein JJ Griese, K Roos, N Cox, HS Shafaat, RMM Branca, J Lehtiö, A Gräslund, ... Proceedings of the National Academy of Sciences 110 (43), 17189-17194, 2013 | 61 | 2013 |
Metal-free ribonucleotide reduction powered by a DOPA radical in Mycoplasma pathogens V Srinivas, H Lebrette, D Lundin, Y Kutin, M Sahlin, M Lerche, J Eirich, ... Nature 563 (7731), 416-420, 2018 | 57 | 2018 |
Proteogenomics of non-small cell lung cancer reveals molecular subtypes associated with specific therapeutic targets and immune-evasion mechanisms J Lehtiö, T Arslan, I Siavelis, Y Pan, F Socciarelli, O Berkovska, HM Umer, ... Nature cancer 2 (11), 1224-1242, 2021 | 56 | 2021 |
Phosphorylation of G3BP1-S149 does not influence stress granule assembly MD Panas, N Kedersha, T Schulte, RM Branca, P Ivanov, P Anderson The Journal of cell biology 218 (7), 2425, 2019 | 51 | 2019 |
Proteomic study of thyroid tumors reveals frequent up-regulation of the Ca2+-binding protein S100A6 in papillary thyroid carcinoma A Sofiadis, A Dinets, LM Orre, RM Branca, CC Juhlin, T Foukakis, ... Thyroid 20 (10), 1067-1076, 2010 | 51 | 2010 |
Mesenchymal state of intimal cells may explain higher propensity to ascending aortic aneurysm in bicuspid aortic valves S Maleki, S Kjellqvist, V Paloschi, J Magné, RMM Branca, L Du, ... Scientific reports 6 (1), 35712, 2016 | 48 | 2016 |
Ribonucleotide reductase inhibitors suppress SAMHD 1 ara‐CTP ase activity enhancing cytarabine efficacy SG Rudd, N Tsesmetzis, K Sanjiv, CBJ Paulin, L Sandhow, J Kutzner, ... EMBO molecular medicine 12 (3), e10419, 2020 | 45 | 2020 |
Tartrate-resistant acid phosphatase (TRAP/ACP5) promotes metastasis-related properties via TGFβ2/TβR and CD44 in MDA-MB-231 breast cancer cells A Reithmeier, E Panizza, M Krumpel, LM Orre, RMM Branca, J Lehtiö, ... BMC cancer 17, 1-19, 2017 | 44 | 2017 |