Characterization of bacterial community associated with phytoplankton bloom in a eutrophic lake in South Norway using 16S rRNA gene amplicon sequence analysis NN Parulekar, P Kolekar, A Jenkins, S Kleiven, H Utkilen, A Johansen, ... PloS one 12 (3), e0173408, 2017 | 89 | 2017 |
Analysis of genotype diversity and evolution of Dengue virus serotype 2 using complete genomes VP Waman, P Kolekar, MR Ramtirthkar, MM Kale, U Kulkarni-Kale PeerJ 4, e2326, 2016 | 77 | 2016 |
Alignment-free distance measure based on return time distribution for sequence analysis: applications to clustering, molecular phylogeny and subtyping P Kolekar, M Kale, U Kulkarni-Kale Molecular phylogenetics and evolution 65 (2), 510-522, 2012 | 70 | 2012 |
Population Structure and Evolution of Rhinoviruses VP Waman, PS Kolekar, MM Kale, U Kulkarni-Kale PloS one 9 (2), e88981, 2014 | 57 | 2014 |
IRESPred: web server for prediction of cellular and viral internal ribosome entry site (IRES) P Kolekar, A Pataskar, U Kulkarni-Kale, J Pal, A Kulkarni Scientific reports 6 (1), 27436, 2016 | 54 | 2016 |
Integrated Genomic Analysis Identifies UBTF Tandem Duplications as a Recurrent Lesion in Pediatric Acute Myeloid Leukemia M Umeda, J Ma, BJ Huang, K Hagiwara, T Westover, S Abdelhamed, ... Blood cancer discovery 3 (3), 194-207, 2022 | 52 | 2022 |
Chemotherapy and mismatch repair deficiency cooperate to fuel TP53 mutagenesis and ALL relapse F Yang, SW Brady, C Tang, H Sun, L Du, MJ Barz, X Ma, Y Chen, H Fang, ... Nature Cancer 2 (8), 819-834, 2021 | 31 | 2021 |
Analysis of solid tumor mutation profiles in liquid biopsy SA Balaji, A Shanmugam, A Chougule, S Sridharan, K Prabhash, A Arya, ... Cancer medicine 7 (11), 5439-5447, 2018 | 24 | 2018 |
SequencErr: measuring and suppressing sequencer errors in next-generation sequencing data EM Davis, Y Sun, Y Liu, P Kolekar, Y Shao, K Szlachta, HL Mulder, D Ren, ... Genome biology 22, 1-18, 2021 | 22 | 2021 |
Genotyping of Mumps viruses based on SH gene: Development of a server using alignment-free and alignment-based methods PS Kolekar, MM Kale, U Kulkarni-Kale Immunome Research 7 (3), 1, 2011 | 18 | 2011 |
CREBBP Alterations are Associated with A Poor Prognosis in de novo AML S Lamble, A. J., Hagiwara, K., Gerbing, R. B., Smith, J. L., Kolekar, P ... Blood, https://doi.org/10.1182/blood.2022017545, 2023 | 14* | 2023 |
Etiology of oncogenic fusions in 5,190 childhood cancers and its clinical and therapeutic implication Y Liu, J Klein, R Bajpai, L Dong, Q Tran, P Kolekar, JL Smith, RE Ries, ... Nature communications 14 (1), 1739, 2023 | 10 | 2023 |
‘Inter‐Arrival Time’Inspired Algorithm and its Application in Clustering and Molecular Phylogeny PS Kolekar, MM Kale, U Kulkarni‐Kale INTERNATIONAL CONFERENCE ON MODELING, OPTIMIZATION, AND COMPUTING (ICMOC …, 2010 | 10 | 2010 |
RV-Typer: A Web Server for Typing of Rhinoviruses Using Alignment-Free Approach PS Kolekar, VP Waman, MM Kale, U Kulkarni-Kale PLoS One 11 (2), e0149350, 2016 | 8 | 2016 |
WNV Typer: a server for genotyping of West Nile viruses using an alignment-free method based on a return time distribution P Kolekar, N Hake, M Kale, U Kulkarni-Kale Journal of virological methods 198, 41-55, 2014 | 8 | 2014 |
NSD2 E1099K drives relapse in pediatric acute lymphoblastic leukemia by disrupting 3D chromatin organization S Narang, NA Evensen, J Saliba, J Pierro, ML Loh, PA Brown, P Kolekar, ... Genome biology 24 (1), 64, 2023 | 7 | 2023 |
CBFB-MYH11 fusion transcripts distinguish acute myeloid leukemias with distinct molecular landscapes and outcomes BJ Huang, JL Smith, YC Wang, K Taghizadeh, AR Leonti, RE Ries, Y Liu, ... Blood Advances 5 (23), 4963-4968, 2021 | 7 | 2021 |
The ISCB student council internship program: Expanding computational biology capacity worldwide J Anupama, M Francescatto, F Rahman, N Fatima, D DeBlasio, ... PLOS Computational Biology 14 (1), e1005802, 2018 | 6 | 2018 |
Analysis of genotype diversity and evolution of Dengue virus serotype 2 using complete genomes. PeerJ. 2016; 4: e2326 VP Waman, P Kolekar, MR Ramtirthkar, MM Kale, U Kulkarni-Kale | 6 | |
IRESPred: Web server for prediction of cellular and viral internal ribosome entry site (IRES). Sci Rep 6: 27436 P Kolekar, A Pataskar, U Kulkarni-Kale, J Pal, A Kulkarni | 5 | 2016 |