| The UCSC genome browser database: 2015 update KR Rosenbloom, J Armstrong, GP Barber, J Casper, H Clawson, ... Nucleic acids research 43 (D1), D670-D681, 2015 | 1082 | 2015 |
| Assemblathon 1: a competitive assessment of de novo short read assembly methods D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ... Genome research 21 (12), 2224-2241, 2011 | 633 | 2011 |
| Genome 10K: a proposal to obtain whole-genome sequence for 10 000 vertebrate species Genome 10K Community of Scientists Journal of Heredity 100 (6), 659-674, 2009 | 482 | 2009 |
| An evolutionary arms race between KRAB zinc-finger genes ZNF91/93 and SVA/L1 retrotransposons FMJ Jacobs, D Greenberg, N Nguyen, M Haeussler, AD Ewing, ... Nature 516 (7530), 242-245, 2014 | 473 | 2014 |
| Track data hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser BJ Raney, TR Dreszer, GP Barber, H Clawson, PA Fujita, T Wang, ... Bioinformatics 30 (7), 1003-1005, 2014 | 421 | 2014 |
| Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs RE Green, EL Braun, J Armstrong, D Earl, N Nguyen, G Hickey, ... Science 346 (6215), 1254449, 2014 | 364 | 2014 |
| Cactus: Algorithms for genome multiple sequence alignment B Paten, D Earl, N Nguyen, M Diekhans, D Zerbino, D Haussler Genome research 21 (9), 1512-1528, 2011 | 286 | 2011 |
| Comparative proteogenomics: combining mass spectrometry and comparative genomics to analyze multiple genomes N Gupta, J Benhamida, V Bhargava, D Goodman, E Kain, I Kerman, ... Genome research 18 (7), 1133-1142, 2008 | 130 | 2008 |
| Alignathon: a competitive assessment of whole-genome alignment methods D Earl, N Nguyen, G Hickey, RS Harris, S Fitzgerald, K Beal, I Seledtsov, ... Genome research 24 (12), 2077-2089, 2014 | 121 | 2014 |
| Non-progressing cancer patients have persistent B cell responses expressing shared antibody paratopes that target public tumor antigens J DeFalco, M Harbell, A Manning-Bog, G Baia, A Scholz, B Millare, ... Clinical Immunology 187, 37-45, 2018 | 109 | 2018 |
| Molecular definition of multiple sites of antibody inhibition of malaria transmission-blocking vaccine antigen Pfs25 SW Scally, B McLeod, A Bosch, K Miura, Q Liang, S Carroll, S Reponen, ... Nature communications 8 (1), 1568, 2017 | 74 | 2017 |
| Building a pan-genome reference for a population N Nguyen, G Hickey, DR Zerbino, B Raney, D Earl, J Armstrong, WJ Kent, ... Journal of Computational Biology 22 (5), 387-401, 2015 | 62 | 2015 |
| Potent antibody lineage against malaria transmission elicited by human vaccination with Pfs25 B McLeod, K Miura, SW Scally, A Bosch, N Nguyen, H Shin, D Kim, ... Nature communications 10 (1), 4328, 2019 | 44 | 2019 |
| Comparative assembly hubs: web-accessible browsers for comparative genomics N Nguyen, G Hickey, BJ Raney, J Armstrong, H Clawson, A Zweig, ... Bioinformatics 30 (23), 3293-3301, 2014 | 34 | 2014 |
| Longitudinal analysis of acute and convalescent B cell responses in a human primary dengue serotype 2 infection model UK Nivarthi, HA Tu, MJ Delacruz, J Swanstrom, B Patel, AP Durbin, ... EBioMedicine 41, 465-478, 2019 | 26 | 2019 |
| Distinct clonal evolution of B-cells in HIV controllers with neutralizing antibody breadth D Cizmeci, G Lofano, E Rossignol, AS Dugast, D Kim, G Cavet, N Nguyen, ... Elife 10, e62648, 2021 | 16 | 2021 |
| 31st annual meeting and associated programs of the society for immunotherapy of cancer (Sitc 2016): Part two: National harbor, md, USA. 9-13 November 2016 C Ager, M Reilley, C Nicholas, T Bartkowiak, A Jaiswal, M Curran, ... Journal for ImmunoTherapy of Cancer 4, 107-221, 2016 | 12 | 2016 |
| Building a pangenome reference for a population N Nguyen, G Hickey, DR Zerbino, B Raney, D Earl, J Armstrong, ... Research in Computational Molecular Biology: 18th Annual International …, 2014 | 9 | 2014 |
| Increased somatic hypermutation in the immunoglobulin sequences of melanoma patients who have durable response to checkpoint inhibitor therapy N Nguyen, A Mamchak, M Severgnini, KS Williamson, X Wu, EF Drabek, ... Cancer Research 78 (13_Supplement), 615-615, 2018 | 3 | 2018 |
| Lower frequencies of circulating suppressive regulatory T cells and higher frequencies of CD4+ naïve T cells at baseline are associated with severe immune-related adverse … M Kovacsovics-Bankowski, JM Sweere, CP Healy, N Sigal, LC Cheng, ... Journal for Immunotherapy of Cancer 12 (1), 2024 | 2 | 2024 |
Dent EarlStaff Software Engineer at Google. Formerly of UCSC, UCLA.在 soe.ucsc.edu 的电子邮件经过验证
