The MARTINI force field: coarse grained model for biomolecular simulations SJ Marrink, HJ Risselada, S Yefimov, DP Tieleman, AH De Vries The Journal of Physical Chemistry B 111 (27), 7812-7824, 2007 | 5833 | 2007 |
The MARTINI coarse-grained force field: extension to proteins L Monticelli, SK Kandasamy, X Periole, RG Larson, DP Tieleman, ... Journal of Chemical Theory and Computation 4 (5), 819-834, 2008 | 2698 | 2008 |
Coarse grained model for semiquantitative lipid simulations SJ Marrink, AH De Vries, AE Mark The Journal of Physical Chemistry B 108 (2), 750-760, 2004 | 2564 | 2004 |
Improved parameters for the MARTINI coarse-grained protein force field DH de Jong, G Singh, WFD Bennett, C Arnarez, TA Wassenaar, ... Journal of Chemical Theory and Computation 9 (1), 687-697, 2013 | 1361 | 2013 |
Perspective on the MARTINI model SJ Marrink, DP Tieleman Chemical Society Reviews 42 (16), 6801-6822, 2013 | 1236 | 2013 |
A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems DP Tieleman, SJ Marrink, HJC Berendsen Biochimica et Biophysica Acta (BBA)-Reviews on Biomembranes 1331 (3), 235-270, 1997 | 1013 | 1997 |
Computational Lipidomics with insane: A Versatile Tool for Generating Custom Membranes for Molecular Simulations TA Wassenaar, HI Ingólfsson, RA Bockmann, DP Tieleman, SJ Marrink Journal of chemical theory and computation 11 (5), 2144-2155, 2015 | 981 | 2015 |
Simulation of water transport through a lipid membrane SJ Marrink, HJC Berendsen The Journal of Physical Chemistry 98 (15), 4155-4168, 1994 | 965 | 1994 |
Polarizable water model for the coarse-grained MARTINI force field SO Yesylevskyy, LV Schäfer, D Sengupta, SJ Marrink PLoS computational biology 6 (6), e1000810, 2010 | 927 | 2010 |
Lipid organization of the plasma membrane HI Ingólfsson, MN Melo, FJ Van Eerden, C Arnarez, CA Lopez, ... Journal of the American Chemical Society 136 (41), 14554-14559, 2014 | 881 | 2014 |
Combining an elastic network with a coarse-grained molecular force field: structure, dynamics, and intermolecular recognition X Periole, M Cavalli, SJ Marrink, MA Ceruso Journal of chemical theory and computation 5 (9), 2531-2543, 2009 | 694 | 2009 |
Martini 3: a general purpose force field for coarse-grained molecular dynamics PCT Souza, R Alessandri, J Barnoud, S Thallmair, I Faustino, ... Nature Methods 18, 382–388, 2021 | 690 | 2021 |
Going backward: A flexible geometric approach to reverse transformation from coarse grained to atomistic models TA Wassenaar, K Pluhackova, RA Böckmann, SJ Marrink, DP Tieleman Journal of Chemical Theory and Computation 10, 676-690, 2014 | 665 | 2014 |
Toroidal pores formed by antimicrobial peptides show significant disorder D Sengupta, H Leontiadou, AE Mark, SJ Marrink Biochimica et Biophysica Acta (BBA)-Biomembranes 1778 (10), 2308-2317, 2008 | 657 | 2008 |
The molecular face of lipid rafts in model membranes HJ Risselada, SJ Marrink Proceedings of the National Academy of Sciences 105 (45), 17367-17372, 2008 | 641 | 2008 |
The power of coarse graining in biomolecular simulations HI Ingólfsson, CA Lopez, JJ Uusitalo, DH Jong, SM Gopal, X Periole, ... Wiley Interdisciplinary Reviews: Computational Molecular Science 4 (3), 225–248, 2014 | 605 | 2014 |
Computational Modeling of Realistic Cell Membranes SJ Marrink, V Corradi, PCT Souza, HI Ingólfsson, DP Tieleman, ... Chemical Reviews 119 (9), 6184–6226, 2019 | 590 | 2019 |
Antimicrobial peptides in action H Leontiadou, AE Mark, SJ Marrink Journal of the American Chemical Society 128 (37), 12156-12161, 2006 | 554 | 2006 |
Simulation of pore formation in lipid bilayers by mechanical stress and electric fields DP Tieleman, H Leontiadou, AE Mark, SJ Marrink Journal of the American Chemical Society 125 (21), 6382-6383, 2003 | 547 | 2003 |
Permeation process of small molecules across lipid membranes studied by molecular dynamics simulations SJ Marrink, HJC Berendsen The Journal of Physical Chemistry 100 (41), 16729-16738, 1996 | 530 | 1996 |