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A. Rasim Barutcu
A. Rasim Barutcu
Senior Bioinformatician, ScitoVation
在 scitovation.com 的电子邮件经过验证 - 首页
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引用次数
引用次数
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Chromatin interaction analysis reveals changes in small chromosome and telomere clustering between epithelial and breast cancer cells
AR Barutcu, BR Lajoie, RP McCord, CE Tye, D Hong, TL Messier, ...
Genome Biology 16 (1), 214, 2015
2282015
A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus
AR Barutcu*, PG Maass, JP Lewandowski, CL Weiner, JL Rinn*
Nature Communications 9 (1), 1444, 2018
1312018
In vivo characterization of Linc-p21 reveals functional cis-regulatory DNA elements
AF Groff, DB Sanchez-Gomez, MML Soruco, C Gerhardinger, AR Barutcu, ...
Cell Reports 16 (8), 2178-2186, 2016
1272016
Interchromosomal interactions: A genomic love story of kissing chromosomes
PG Maass*, AR Barutcu*, JL Rinn
J Cell Biol 218 (1), 27-38, 2019
1132019
SMARCA4 regulates gene expression and higher-order chromatin structure in proliferating mammary epithelial cells
AR Barutcu, BR Lajoie, AJ Fritz, RP McCord, JA Nickerson, AJ van Wijnen, ...
Genome Research 26 (9), 1188-1201, 2016
1022016
Spatiotemporal allele organization by allele-specific CRISPR live-cell imaging (SNP-CLING)
PG Maass, AR Barutcu, DM Shechner, CL Weiner, M Melé, JL Rinn
Nature Structural & Molecular Biology, 176-184, 2018
922018
Inter-chromosomal contact properties in live-cell imaging and in Hi-C
PG Maass, AR Barutcu, CL Weiner, JL Rinn
Molecular Cell 69 (6), 1039-1045. e3, 2018
862018
Differential contribution of steady‐state RNA and active transcription in chromatin organization
AR Barutcu*, BJ Blencowe, JL Rinn*
EMBO Reports, 2019
742019
RUNX1 contributes to higher-order chromatin organization and gene regulation in breast cancer cells
AR Barutcu, D Hong, BR Lajoie, RP McCord, AJ van Wijnen, JB Lian, ...
Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1859 (11 …, 2016
732016
C-ing the Genome: A Compendium of Chromosome Conformation Capture Methods to Study Higher-Order Chromatin Organization
AR Barutcu, AJ Fritz, SK Zaidi, AJ van Wijnen, JB Lian, JL Stein, ...
Journal of Cellular Physiology 231 (1), 2016
732016
Chromosomes at work: organization of chromosome territories in the interphase nucleus
AJ Fritz, AR Barutcu, L Martin‐Buley, AJ van Wijnen, SK Zaidi, ...
Journal of Cellular Biochemistry 117 (1), 9-19, 2016
602016
Yeast one-hybrid assays for gene-centered human gene regulatory network mapping
JS Reece-Hoyes, AR Barutcu, RP McCord, JS Jeong, L Jiang, ...
Nature Methods 8 (12), 1050, 2011
562011
Systematic mapping of nuclear domain-associated transcripts reveals speckles and lamina as hubs of functionally distinct retained introns
AR Barutcu*, M Wu*, U Braunschweig, BJA Dyakov, Z Luo, KM Turner, ...
Molecular Cell, 2022
542022
Intranuclear and higher‐order chromatin organization of the major histone gene cluster in breast cancer
AJ Fritz, PN Ghule, JR Boyd, CE Tye, NA Page, D Hong, DJ Shirley, ...
Journal of Cellular Physiology 233 (2), 1278-1290, 2018
472018
Enhancers in the Peril lincRNA locus regulate distant but not local genes
AF Groff, AR Barutcu, JP Lewandowski, JL Rinn
Genome Biology 19 (1), 219, 2018
342018
The connection between BRG1, CTCF and topoisomerases at TAD boundaries
AR Barutcu, JB Lian, JL Stein, GS Stein, AN Imbalzano
Nucleus 8 (2), 150-155, 2017
342017
Epigenetic control of cell cycle-dependent histone gene expression is a principal component of the abbreviated pluripotent cell cycle
R Medina, PN Ghule, F Cruzat, AR Barutcu, M Montecino, JL Stein, ...
Molecular and Cellular Biology 32 (19), 3860-3871, 2012
322012
Epigenetic landscape during osteoblastogenesis defines a differentiation-dependent Runx2 promoter region
PWL Tai, H Wu, JAR Gordon, TW Whitfield, AR Barutcu, AJ Van Wijnen, ...
Gene 550 (1), 1-9, 2014
312014
The bone-specific Runx2-P1 promoter displays conserved three-dimensional chromatin structure with the syntenic Supt3h promoter
AR Barutcu, PWL Tai, H Wu, JAR Gordon, TW Whitfield, JR Dobson, ...
Nucleic Acids Research 42 (16), 10360-10372, 2014
292014
Identifying nuclear matrix‐attached DNA across the genome
JR Dobson, D Hong, AR Barutcu, H Wu, AN Imbalzano, JB Lian, JL Stein, ...
Journal of Cellular Physiology 232 (6), 1295-1305, 2017
212017
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