Regulatory activities of transposable elements: from conflicts to benefits EB Chuong, NC Elde, C Feschotte Nature Reviews Genetics 18 (2), 71-86, 2017 | 1189 | 2017 |
Regulatory evolution of innate immunity through co-option of endogenous retroviruses EB Chuong, NC Elde, C Feschotte Science 351 (6277), 1083-1087, 2016 | 871 | 2016 |
Endogenous retroviruses function as species-specific enhancer elements in the placenta EB Chuong, MAK Rumi, MJ Soares, JC Baker Nature genetics 45 (3), 325-329, 2013 | 438 | 2013 |
Chromatin and transcriptional signatures for Nodal signaling during endoderm formation in hESCs SW Kim, SJ Yoon, E Chuong, C Oyolu, AE Wills, R Gupta, J Baker Developmental biology 357 (2), 492-504, 2011 | 158 | 2011 |
Retroviruses facilitate the rapid evolution of the mammalian placenta EB Chuong Bioessays 35 (10), 853-861, 2013 | 109 | 2013 |
The placenta goes viral: Retroviruses control gene expression in pregnancy EB Chuong PLoS biology 16 (10), e3000028, 2018 | 94 | 2018 |
Copy number variation is a fundamental aspect of the placental genome RL Hannibal, EB Chuong, JC Rivera-Mulia, DM Gilbert, A Valouev, ... PLoS genetics 10 (5), e1004290, 2014 | 78 | 2014 |
Comparative analysis of testis protein evolution in rodents LM Turner, EB Chuong, HE Hoekstra Genetics 179 (4), 2075-2089, 2008 | 78 | 2008 |
HEB and E2A function as SMAD/FOXH1 cofactors SJ Yoon, AE Wills, E Chuong, R Gupta, JC Baker Genes & development 25 (15), 1654-1661, 2011 | 74 | 2011 |
Maternal–fetal conflict: rapidly evolving proteins in the rodent placenta EB Chuong, W Tong, HE Hoekstra Molecular biology and evolution 27 (6), 1221-1225, 2010 | 51 | 2010 |
Molecular conservation of marsupial and eutherian placentation and lactation MW Guernsey, EB Chuong, G Cornelis, MB Renfree, JC Baker Elife 6, e27450, 2017 | 46 | 2017 |
Analysis of 3D genomic interactions identifies candidate host genes that transposable elements potentially regulate R Raviram, PP Rocha, VM Luo, E Swanzey, ER Miraldi, EB Chuong, ... Genome biology 19, 1-19, 2018 | 44 | 2018 |
Disruption of promoter memory by synthesis of a long noncoding RNA Y Yu, RM Yarrington, EB Chuong, NC Elde, DJ Stillman Proceedings of the National Academy of Sciences 113 (34), 9575-9580, 2016 | 29 | 2016 |
Emerging roles for endogenous retroviruses in immune epigenetic regulation CA Buttler, EB Chuong Immunological reviews 305 (1), 165-178, 2022 | 23 | 2022 |
Crossroads between transposons and gene regulation MR Branco, EB Chuong Philosophical Transactions of the Royal Society B 375 (1795), 20190330, 2020 | 20 | 2020 |
Evolutionary perspectives into placental biology and disease EB Chuong, RL Hannibal, SL Green, JC Baker Applied & translational genomics 2, 64-69, 2013 | 18 | 2013 |
Ruminant-specific retrotransposons shape regulatory evolution of bovine immunity CJ Kelly, CG Chitko-McKown, EB Chuong Genome Research 32 (8), 1474-1486, 2022 | 17 | 2022 |
Noncoding RNAs: biology and applications—a Keystone Symposia report J Cable, E Heard, T Hirose, KV Prasanth, LL Chen, JE Henninger, ... Annals of the new York Academy of Sciences 1506 (1), 118-141, 2021 | 15 | 2021 |
Snake venom gene expression is coordinated by novel regulatory architecture and the integration of multiple co-opted vertebrate pathways BW Perry, SS Gopalan, GIM Pasquesi, DR Schield, AK Westfall, CF Smith, ... Genome Research 32 (6), 1058-1073, 2022 | 13 | 2022 |
Transposable elements teach T cells new tricks A Ivancevic, EB Chuong Proceedings of the National Academy of Sciences 117 (17), 9145-9147, 2020 | 13 | 2020 |