关注
Zak Costello
Zak Costello
Machine Learning Scientist, Generate Biomedicines
在 lbl.gov 的电子邮件经过验证
标题
引用次数
引用次数
年份
Industrial brewing yeast engineered for the production of primary flavor determinants in hopped beer
CM Denby, RA Li, VT Vu, Z Costello, W Lin, LJG Chan, J Williams, ...
Nature communications 9 (1), 965, 2018
2042018
A machine learning approach to predict metabolic pathway dynamics from time-series multiomics data
Z Costello, HG Martin
NPJ systems biology and applications 4 (1), 1-14, 2018
2022018
Combining mechanistic and machine learning models for predictive engineering and optimization of tryptophan metabolism
J Zhang, SD Petersen, T Radivojevic, A Ramirez, A Pérez-Manríquez, ...
Nature communications 11 (1), 4880, 2020
2002020
A machine learning Automated Recommendation Tool for synthetic biology
T Radivojević, Z Costello, K Workman, H Garcia Martin
Nature communications 11 (1), 4879, 2020
1792020
Illuminating protein space with a programmable generative model
JB Ingraham, M Baranov, Z Costello, KW Barber, W Wang, A Ismail, ...
Nature 623 (7989), 1070-1078, 2023
1762023
Lessons from Two Design–Build–Test–Learn Cycles of Dodecanol Production in Escherichia coli Aided by Machine Learning
P Opgenorth, Z Costello, T Okada, G Goyal, Y Chen, J Gin, V Benites, ...
ACS synthetic biology 8 (6), 1337-1351, 2019
1372019
Distributed frequency control of prosumer-based electric energy systems
MH Nazari, Z Costello, MJ Feizollahi, S Grijalva, M Egerstedt
IEEE Transactions on Power Systems 29 (6), 2934-2942, 2014
782014
The experiment data depot: a web-based software tool for biological experimental data storage, sharing, and visualization
WC Morrell, GW Birkel, M Forrer, T Lopez, TWH Backman, M Dussault, ...
ACS synthetic biology 6 (12), 2248-2259, 2017
532017
Automated “cells-to-peptides” sample preparation workflow for high-throughput, quantitative proteomic assays of microbes
Y Chen, JM Guenther, JW Gin, LJG Chan, Z Costello, TL Ogorzalek, ...
Journal of proteome research 18 (10), 3752-3761, 2019
432019
Identification, Characterization, and Application of a Highly Sensitive Lactam Biosensor from Pseudomonas putida
MG Thompson, AN Pearson, JF Barajas, P Cruz-Morales, N Sedaghatian, ...
ACS synthetic biology 9 (1), 53-62, 2019
362019
How to hallucinate functional proteins
Z Costello, H Garcia Martin
arXiv e-prints, arXiv: 1903.00458, 2019
322019
Distributed power allocation in prosumer networks
T Ramachandran, Z Costello, P Kingston, S Grijalva, M Egerstedt
IFAC Proceedings Volumes 45 (26), 156-161, 2012
232012
Robust Characterization of Two Distinct Glutarate Sensing Transcription Factors of Pseudomonas putida l-Lysine Metabolism
MG Thompson, Z Costello, NFC Hummel, P Cruz-Morales, ...
ACS Synthetic Biology 8 (10), 2385-2396, 2019
202019
Industrial brewing yeast engineered for the production of primary flavor determinants in hopped beer. Nat Commun 9: 965
CM Denby, RA Li, VT Vu, Z Costello, W Lin, LJG Chan, J Williams, ...
162018
Investigation of Bar-seq as a method to study population dynamics of Saccharomyces cerevisiae deletion library during bioreactor cultivation
M Wehrs, MG Thompson, D Banerjee, JP Prahl, NM Morella, CA Barcelos, ...
Microbial cell factories 19, 1-15, 2020
132020
The degree of nonholonomy in distributed computations
Z Costello, M Egerstedt
53rd IEEE Conference on Decision and Control, 6092-6098, 2014
102014
Lessons from two design–build–test–learn cycles of dodecanol production in Escherichia coli aided by machine learning. ACS Synth. Biol. 8, 1337–1351
P Opgenorth, Z Costello, T Okada, G Goyal, Y Chen, J Gin, V Benites, ...
72019
Parallel integration and chromosomal expansion of metabolic pathways
G Goyal, Z Costello, J Alonso-Gutierrez, A Kang, TS Lee, H Garcia Martin, ...
ACS synthetic biology 7 (11), 2566-2576, 2018
72018
From global, finite-time, linear computations to local, edge-based interaction rules
Z Costello, M Egerstedt
IEEE Transactions on Automatic Control 60 (8), 2237-2241, 2014
72014
BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale
TWH Backman, C Schenk, T Radivojevic, D Ando, J Singh, JJ Czajka, ...
PLoS Computational Biology 19 (11), e1011111, 2023
12023
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