ToppGene Suite for gene list enrichment analysis and candidate gene prioritization J Chen, EE Bardes, BJ Aronow, AG Jegga Nucleic acids research 37 (suppl 2), W305-W311, 2009 | 2937 | 2009 |
An integrated database of genes responsive to the Myc oncogenic transcription factor: identification of direct genomic targets KI Zeller, AG Jegga, BJ Aronow, KA O'Donnell, CV Dang Genome biology 4, 1-10, 2003 | 605 | 2003 |
Canonical genetic signatures of the adult human brain M Hawrylycz, JA Miller, V Menon, D Feng, T Dolbeare, ... Nature neuroscience 18 (12), 1832-1844, 2015 | 576 | 2015 |
Activation of IKKα target genes depends on recognition of specific κB binding sites by RelB: p52 dimers G Bonizzi, M Bebien, DC Otero, KE Johnson‐Vroom, Y Cao, D Vu, ... The EMBO journal 23 (21), 4202-4210, 2004 | 442 | 2004 |
Disease candidate gene identification and prioritization using protein interaction networks J Chen, B Aronow, A Jegga BMC bioinformatics 10 (1), 73, 2009 | 416 | 2009 |
Evaluation of myc E-box phylogenetic footprints in glycolytic genes by chromatin immunoprecipitation assays J Kim, KI Zeller, Y Wang, AG Jegga, BJ Aronow, KA O'Donnell, CV Dang Molecular and cellular biology 24 (13), 5923, 2004 | 413 | 2004 |
ToppCluster: a multiple gene list feature analyzer for comparative enrichment clustering and network-based dissection of biological systems V Kaimal, EE Bardes, SC Tabar, AG Jegga, BJ Aronow Nucleic Acids Research 38 (suppl 2), W96-W102, 2010 | 379 | 2010 |
Transcriptional recapitulation and subversion of embryonic colon development by mouse colon tumor models and human colon cancer S Kaiser, YK Park, JL Franklin, RB Halberg, M Yu, WJ Jessen, ... Genome biology 8, 1-26, 2007 | 359 | 2007 |
Improved human disease candidate gene prioritization using mouse phenotype J Chen, H Xu, B Aronow, A Jegga BMC bioinformatics 8 (1), 392, 2007 | 323 | 2007 |
Drug repositioning for orphan diseases D Sardana, C Zhu, M Zhang, RC Gudivada, L Yang, AG Jegga Briefings in bioinformatics 12 (4), 346-356, 2011 | 265 | 2011 |
Atlas of gene expression in the developing kidney at microanatomic resolution EW Brunskill, BJ Aronow, K Georgas, B Rumballe, MT Valerius, J Aronow, ... Developmental cell 15 (5), 781-791, 2008 | 241 | 2008 |
Large-scale molecular comparison of human schwann cells to malignant peripheral nerve sheath tumor cell lines and tissues SJ Miller, F Rangwala, J Williams, P Ackerman, S Kong, AG Jegga, ... Cancer research 66 (5), 2584, 2006 | 220 | 2006 |
Pattern of sequence variation across 213 environmental response genes RJ Livingston, A Von Niederhausern, AG Jegga, DC Crawford, ... Genome research 14 (10a), 1821-1831, 2004 | 212 | 2004 |
Synergistic effects of the GATA-4-mediated miR-144/451 cluster in protection against simulated ischemia/reperfusion-induced cardiomyocyte death X Zhang, X Wang, H Zhu, C Zhu, Y Wang, WT Pu, AG Jegga, GC Fan Journal of molecular and cellular cardiology 49 (5), 841-850, 2010 | 210 | 2010 |
Changing trends in computational drug repositioning JK Yella, S Yaddanapudi, Y Wang, AG Jegga Pharmaceuticals 11 (2), 57, 2018 | 170 | 2018 |
Identification of IFRD1 as a modifier gene for cystic fibrosis lung disease YY Gu, ITW Harley, LB Henderson, BJ Aronow, I Vietor, LA Huber, ... Nature 458 (7241), 1039-1042, 2009 | 165 | 2009 |
Unrestrained erythroblast development in Nix−/− mice reveals a mechanism for apoptotic modulation of erythropoiesis A Diwan, AG Koesters, AM Odley, S Pushkaran, CP Baines, BT Spike, ... Proceedings of the National Academy of Sciences 104 (16), 6794-6799, 2007 | 165 | 2007 |
Computational drug repositioning through heterogeneous network clustering C Wu, RC Gudivada, BJ Aronow, AG Jegga BMC systems biology 7, 1-9, 2013 | 162 | 2013 |
Pharmacological inhibition of apical sodium‐dependent bile acid transporter changes bile composition and blocks progression of sclerosing cholangitis in multidrug resistance 2 … AG Miethke, W Zhang, J Simmons, AE Taylor, T Shi, SK Shanmukhappa, ... Hepatology 63 (2), 512-523, 2016 | 154 | 2016 |
A gene regulatory network controlling hhex transcription in the anterior endoderm of the organizer SA Rankin, J Kormish, M Kofron, A Jegga, AM Zorn Developmental biology 351 (2), 297-310, 2011 | 152 | 2011 |