TET proteins regulate the lineage specification and TCR-mediated expansion of iNKT cells A Tsagaratou, E González-Avalos, S Rautio, JP Scott-Browne, S Togher, ... Nature immunology 18 (1), 45-53, 2017 | 132 | 2017 |
Comparative analysis of human and mouse transcriptomes of Th17 cell priming S Tuomela, S Rautio, H Ahlfors, V Öling, V Salo, U Ullah, Z Chen, ... Oncotarget 7 (12), 13416, 2016 | 56 | 2016 |
Transcriptional repressor HIC1 contributes to suppressive function of human induced regulatory T cells U Ullah, SBA Andrabi, SK Tripathi, O Dirasantha, K Kanduri, S Rautio, ... Cell reports 22 (8), 2094-2106, 2018 | 45 | 2018 |
GIMAP GTPase family genes: potential modifiers in autoimmune diabetes, asthma, and allergy MT Heinonen, AP Laine, C Söderhäll, O Gruzieva, S Rautio, E Melén, ... The Journal of Immunology 194 (12), 5885-5894, 2015 | 42 | 2015 |
Time-resolved transcriptome and proteome landscape of human regulatory T cell (Treg) differentiation reveals novel regulators of FOXP3 A Schmidt, F Marabita, NA Kiani, CC Gross, HJ Johansson, S Éliás, ... BMC biology 16, 1-35, 2018 | 30 | 2018 |
Analyzing Th17 cell differentiation dynamics using a novel integrative modeling framework for time-course RNA sequencing data J Intosalmi, H Ahlfors, S Rautio, H Mannerstöm, ZJ Chen, R Lahesmaa, ... BMC systems biology 9, 1-12, 2015 | 15 | 2015 |
A subpopulation model to analyze heterogeneous cell differentiation dynamics YH Chan, J Intosalmi, S Rautio, H Lähdesmäki Bioinformatics 32 (21), 3306-3313, 2016 | 9 | 2016 |
PairGP: Gaussian process modeling of longitudinal data from paired multi-condition studies M Vantini, H Mannerström, S Rautio, H Ahlfors, B Stockinger, ... Computers in Biology and Medicine 143, 105268, 2022 | 3 | 2022 |
MixChIP: a probabilistic method for cell type specific protein-DNA binding analysis S Rautio, H Lähdesmäki BMC bioinformatics 16, 1-12, 2015 | 2 | 2015 |
Additional file 7: of Time-resolved transcriptome and proteome landscape of human regulatory T cell (Treg) differentiation reveals novel regulators of FOXP3 A Schmidt, F Marabita, NA Kiani, CC Gross, HJ Johansson, S Éliás, ... figshare, 2018 | | 2018 |
TET2 and 3 proteins control iNKT cell lineage specification and TCR mediated expansion A Tsagaratou, EG Avalos, S Rautio, JS Browne, S Togher, W Pastor, ... The Journal of Immunology 198 (1_Supplement), 215.11-215.11, 2017 | | 2017 |
MixChIP S Rautio, H Lähdesmäki | | 2015 |
Novel factors involved in Th17 cell differentiation H Ahlfors, S Rautio, T Aijo, H Lahdesmaki, B Stockinger IMMUNOLOGY 137, 356-356, 2012 | | 2012 |
Analyzing time-series RNA-seq data for T helper 17 cell differentiation mouse and human S Rautio | | 2012 |