| Web-based kinetic modelling using JWS Online BG Olivier, JL Snoep Bioinformatics 20 (13), 2143-2144, 2004 | 410 | 2004 |
| MEMOTE for standardized genome-scale metabolic model testing C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... Nature biotechnology 38 (3), 272-276, 2020 | 354 | 2020 |
| Modelling cellular systems with PySCeS BG Olivier, JM Rohwer, JHS Hofmeyr Bioinformatics 21 (4), 560-561, 2005 | 244 | 2005 |
| Community flux balance analysis for microbial consortia at balanced growth RA Khandelwal, BG Olivier, WFM Röling, B Teusink, FJ Bruggeman PloS one 8 (5), e64567, 2013 | 235 | 2013 |
| A systematic assessment of current genome-scale metabolic reconstruction tools SN Mendoza, BG Olivier, D Molenaar, B Teusink Genome biology 20, 1-20, 2019 | 214 | 2019 |
| SBML Level 3: an extensible format for the exchange and reuse of biological models SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ... Molecular systems biology 16 (8), e9110, 2020 | 212 | 2020 |
| Towards building the silicon cell: a modular approach JL Snoep, F Bruggeman, BG Olivier, HV Westerhoff Biosystems 83 (2-3), 207-216, 2006 | 168 | 2006 |
| COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project FT Bergmann, R Adams, S Moodie, J Cooper, M Glont, M Golebiewski, ... BMC bioinformatics 15, 1-9, 2014 | 155 | 2014 |
| FAME, the flux analysis and modeling environment J Boele, BG Olivier, B Teusink BMC systems biology 6, 1-5, 2012 | 115 | 2012 |
| Constraint-based stoichiometric modelling from single organisms to microbial communities W Gottstein, BG Olivier, FJ Bruggeman, B Teusink Journal of the Royal Society Interface 13 (124), 20160627, 2016 | 106 | 2016 |
| The systems biology markup language (SBML): language specification for level 3 version 2 core release 2 M Hucka, FT Bergmann, C Chaouiya, A Dräger, S Hoops, SM Keating, ... Journal of integrative bioinformatics 16 (2), 20190021, 2019 | 105 | 2019 |
| StochPy: a comprehensive, user-friendly tool for simulating stochastic biological processes TR Maarleveld, BG Olivier, FJ Bruggeman PloS one 8 (11), e79345, 2013 | 101 | 2013 |
| Optimal flux spaces of genome-scale stoichiometric models are determined by a few subnetworks SM Kelk, BG Olivier, L Stougie, FJ Bruggeman Scientific reports 2 (1), 580, 2012 | 100 | 2012 |
| The systems biology markup language (SBML): language specification for level 3 version 2 core M Hucka, FT Bergmann, A Dräger, S Hoops, SM Keating, N Le Novère, ... Journal of integrative bioinformatics 15 (1), 20170081, 2018 | 95 | 2018 |
| Basic concepts and principles of stoichiometric modeling of metabolic networks TR Maarleveld, RA Khandelwal, BG Olivier, B Teusink, FJ Bruggeman Biotechnology journal 8 (9), 997-1008, 2013 | 90 | 2013 |
| Systems modeling approaches for microbial community studies: from metagenomics to inference of the community structure M Hanemaaijer, WFM Röling, BG Olivier, RA Khandelwal, B Teusink, ... Frontiers in microbiology 6, 213, 2015 | 86 | 2015 |
| The systems biology markup language (SBML): Language specification for level 3 version 1 core L Smith, D Wilkinson, M Hucka, F Bergmann, S Hoops, S Keating, S Sahle, ... Nature Precedings, 1-1, 2010 | 79 | 2010 |
| Harmonizing semantic annotations for computational models in biology ML Neal, M König, D Nickerson, G Mısırlı, R Kalbasi, A Dräger, K Atalag, ... Briefings in bioinformatics 20 (2), 540-550, 2019 | 72 | 2019 |
| SBML level 3 package: flux balance constraints version 2 BG Olivier, FT Bergmann Journal of integrative bioinformatics 15 (1), 20170082, 2018 | 68 | 2018 |
| Memote: A community driven effort towards a standardized genome-scale metabolic model test suite C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... BioRxiv, 350991, 2018 | 59 | 2018 |
Frank J BruggemanProfessor, VU University在 vu.nl 的电子邮件经过验证
