| Web‐based analysis and publication of flow cytometry experiments N Kotecha, PO Krutzik, JM Irish Current protocols in cytometry 53 (1), 10.17. 1-10.17. 24, 2010 | 553 | 2010 |
| Mapping normal and cancer cell signalling networks: towards single-cell proteomics JM Irish, N Kotecha, GP Nolan Nature Reviews Cancer 6 (2), 146-155, 2006 | 389 | 2006 |
| Single-cell profiling identifies aberrant STAT5 activation in myeloid malignancies with specific clinical and biologic correlates N Kotecha, NJ Flores, JM Irish, EF Simonds, DS Sakai, S Archambeault, ... Cancer cell 14 (4), 335-343, 2008 | 283 | 2008 |
| FlowRepository: A resource of annotated flow cytometry datasets associated with peer‐reviewed publications J Spidlen, K Breuer, C Rosenberg, N Kotecha, RR Brinkman Cytometry Part A 81 (9), 727-731, 2012 | 192 | 2012 |
| K-RasG12D expression induces hyperproliferation and aberrant signaling in primary hematopoietic stem/progenitor cells MEM Van Meter, E Díaz-Flores, JA Archard, E Passegué, JM Irish, ... Blood 109 (9), 3945-3952, 2007 | 136 | 2007 |
| Cytobank: providing an analytics platform for community cytometry data analysis and collaboration TJ Chen, N Kotecha High-dimensional single cell analysis: Mass cytometry, multi-parametric flow …, 2014 | 118 | 2014 |
| Expression of PD-1 by T cells in malignant glioma patients reflects exhaustion and activation TB Davidson, A Lee, M Hsu, S Sedighim, J Orpilla, J Treger, M Mastall, ... Clinical Cancer Research 25 (6), 1913-1922, 2019 | 66 | 2019 |
| Evaluation of GPT-3.5 and GPT-4 for supporting real-world information needs in healthcare delivery D Dash, R Thapa, JM Banda, A Swaminathan, M Cheatham, M Kashyap, ... arXiv preprint arXiv:2304.13714, 2023 | 33 | 2023 |
| WebFlow: a software package for high-throughput analysis of flow cytometry data MM Hammer, N Kotecha, JM Irish, GP Nolan, PO Krutzik ASSAY and Drug Development Technologies 7 (1), 44-55, 2009 | 19 | 2009 |
| DEPLOYR: a technical framework for deploying custom real-time machine learning models into the electronic medical record CK Corbin, R Maclay, A Acharya, S Mony, S Punnathanam, R Thapa, ... Journal of the American Medical Informatics Association 30 (9), 1532-1542, 2023 | 15 | 2023 |
| Pathway knowledge base: integrating BioPAX compliant data sources N Kotecha, K Bruck, W Lu, N Shah HCLS Workshop, ISWC, 2006 | 8 | 2006 |
| NetworkPainter: dynamic intracellular pathway animation in Cytobank JR Karr, H Guturu, EY Chen, SL Blair, JM Irish, N Kotecha, MW Covert BMC bioinformatics 16, 1-7, 2015 | 5 | 2015 |
| Pathway knowledge base: An integrated pathway resource using BioPAX N Kotecha, K Bruck, W Lu, N Shah Applied Ontology 3 (4), 235-245, 2008 | 3 | 2008 |
| A Novel Assay for Juvenile Myelomonocytic Leukemia Based on Aberrant Signaling Networks Measured Via Phospho-Specific Flow Cytometry Reduces Diagnosis Time from Weeks to Days. N Kotecha, NJ Flores, JM Irish, D Sakaguchi, S Archambeault, ... Blood 110 (11), 546, 2007 | 2 | 2007 |
| Pathway Knowledge Base: Integrating BioPAX compliant pathway knowledgebases N Kotecha, K Bruck, W Lu, N Shah Proceedings of the Workshop for W3C Semantic Web Health Care & Life Sciences, 2006 | 2 | 2006 |
| Standing on FURM ground--A framework for evaluating Fair, Useful, and Reliable AI Models in healthcare systems A Callahan, D McElfresh, JM Banda, G Bunney, D Char, J Chen, ... arXiv preprint arXiv:2403.07911, 2024 | | 2024 |
| Integrative, Multi-Cohort Analysis of Epstein-Barr Virus (EBV) Positive and Negative Tumor Samples to Identify Gene-Signatures Associated with EBV Oncogenesis. E Maloney, E Bongen, F Vallania, N Kotecha, P Khatri, O Martinez AMERICAN JOURNAL OF TRANSPLANTATION 16, 364-364, 2016 | | 2016 |
| Revealing the Immune Population Hierarchy Using Novel Interactive Visualization Tools, a Comparison of Methods: Sunburst, viSNE, and Spade on Mass Cytometry Data TJ Chen, N Kotecha Blood, The Journal of the American Society of Hematology 124 (21), 5122-5122, 2014 | | 2014 |
| Optimizing the flow cytometric analysis of cell signaling in heterogeneous samples G Gao, C Coveney, X Wang, X Wu, AL Wei, X Ji, L Anderson, N Kotecha, ... Cancer Research 72 (8_Supplement), 157-157, 2012 | | 2012 |
| Development, Management and Analysis of Flow Cytometry Based Cell Signaling Assays in a Translational Research Environment to Diagnose Juvenile Myelomonocytic Leukemia N Kotecha ProQuest, 2008 | | 2008 |
