Phylogenomics resolves the timing and pattern of insect evolution B Misof, S Liu, K Meusemann, RS Peters, A Donath, C Mayer, ... Science 346 (6210), 763-767, 2014 | 2572 | 2014 |
Metagenomic species profiling using universal phylogenetic marker genes S Sunagawa, DR Mende, G Zeller, F Izquierdo-Carrasco, SA Berger, ... Nature methods 10 (12), 1196-1199, 2013 | 511 | 2013 |
Nanopore DNA sequencing and genome assembly on the International Space Station SL Castro-Wallace, CY Chiu, KK John, SE Stahl, KH Rubins, ... Scientific reports 7 (1), 18022, 2017 | 381 | 2017 |
RAxML-Light: a tool for computing terabyte phylogenies A Stamatakis, AJ Aberer, C Goll, SA Smith, SA Berger, ... Bioinformatics 28 (15), 2064-2066, 2012 | 162 | 2012 |
The phylogenetic likelihood library T Flouri, F Izquierdo-Carrasco, D Darriba, AJ Aberer, LT Nguyen, BQ Minh, ... Systematic biology 64 (2), 356-362, 2015 | 161 | 2015 |
What’s in my pot? Real-time species identification on the MinION™ S Juul, F Izquierdo, A Hurst, X Dai, A Wright, E Kulesha, R Pettett, ... BioRxiv, 030742, 2015 | 141 | 2015 |
Algorithms, data structures, and numerics for likelihood-based phylogenetic inference of huge trees F Izquierdo-Carrasco, SA Smith, A Stamatakis BMC bioinformatics 12, 1-14, 2011 | 70 | 2011 |
A generic vectorization scheme and a GPU kernel for the phylogenetic likelihood library F Izquierdo-Carrasco, N Alachiotis, S Berger, T Flouri, SP Pissis, ... 2013 IEEE International Symposium on Parallel & Distributed Processing …, 2013 | 29 | 2013 |
PUmPER: phylogenies updated perpetually F Izquierdo-Carrasco, J Cazes, SA Smith, A Stamatakis Bioinformatics 30 (10), 1476-1477, 2014 | 21 | 2014 |
Boosting the performance of bayesian divergence time estimation with the phylogenetic likelihood library D Darriba, A Aberer, T Flouri, TA Heath, F Izquierdo-Carrasco, ... 2013 IEEE International Symposium on Parallel & Distributed Processing …, 2013 | 18 | 2013 |
What’s in my pot? Real-time species identification on the MinION. bioRxiv, 030742 S Juul, F Izquierdo, A Hurst, X Dai, A Wright, E Kulesha, DJ Turner | 11 | 2015 |
Computing the phylogenetic likelihood function out-of-core F Izquierdo-Carrasco, A Stamatakis 2011 IEEE International Symposium on Parallel and Distributed Processing …, 2011 | 11 | 2011 |
Trading memory for running time in phylogenetic likelihood computations F Izquierdo-Carrasco, J Gagneur, A Stamatakis Heidelberg Institute for Theoretical Studies, 2011 | 10 | 2011 |
Result verification, code verification and computation of support values in phylogenetics A Stamatakis, F Izquierdo-Carrasco Briefings in bioinformatics 12 (3), 270-279, 2011 | 9 | 2011 |
Trading running time for memory in phylogenetic likelihood computations. F Izquierdo-Carrasco, J Gagneur, A Stamatakis Bioinformatics, 86-95, 2012 | 8 | 2012 |
What’s in my pot? Real-time species identification on the MinION. bioRxiv. 2015 S Juul, F Izquierdo, A Hurst Publisher Full Text, 0 | 5 | |
P1. 32 Hand-held rapid whole genome nanopore sequencing to predict Neisseria gonorrhoeae antibiotic susceptibility: steps towards clinic based tailored antimicrobial therapy LT Phillips, A Witney, F Izquierdo-Carrasco, S Mayes, A Wright, K Laing, ... Sexually Transmitted Infections 93 (Suppl 2), A56-A56, 2017 | 4 | 2017 |
Data from: Phylogenomics resolves the timing and pattern of insect evolution B Misof, S Liu, K Meusemann, RS Peters, A Donath, C Mayer, ... | 4 | 2014 |
Heuristic algorithms for the protein model assignment problem J Hauser, K Kobert, F Izquierdo-Carrasco, K Meusemann, B Misof, ... Bioinformatics Research and Applications: 9th International Symposium, ISBRA …, 2013 | 4 | 2013 |
Inference of huge trees under maximum likelihood F Izquierdo-Carrasco, A Stamatakis 2012 IEEE 26th International Parallel and Distributed Processing Symposium …, 2012 | 2 | 2012 |