mapman: a user‐driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes O Thimm, O Bläsing, Y Gibon, A Nagel, S Meyer, P Krüger, J Selbig, ... The Plant Journal 37 (6), 914-939, 2004 | 3452 | 2004 |
pcaMethods—a bioconductor package providing PCA methods for incomplete data W Stacklies, H Redestig, M Scholz, D Walther, J Selbig Bioinformatics 23 (9), 1164-1167, 2007 | 1119 | 2007 |
The mutual information: detecting and evaluating dependencies between variables R Steuer, J Kurths, CO Daub, J Weise, J Selbig Bioinformatics 18 (suppl_2), S231-S240, 2002 | 969 | 2002 |
Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of coresponding genes, and comparison with known responses B Usadel, A Nagel, O Thimm, H Redestig, OE Blaesing, N Palacios-Rojas, ... Plant physiology 138 (3), 1195-1204, 2005 | 654 | 2005 |
Metabolomics of temperature stress C Guy, F Kaplan, J Kopka, J Selbig, DK Hincha Physiologia plantarum 132 (2), 220-235, 2008 | 624 | 2008 |
A robot-based platform to measure multiple enzyme activities in Arabidopsis using a set of cycling assays: comparison of changes of enzyme activities and transcript levels … Y Gibon, OE Blaesing, J Hannemann, P Carillo, M Hohne, JHM Hendriks, ... The Plant Cell 16 (12), 3304-3325, 2004 | 599 | 2004 |
Starch as a major integrator in the regulation of plant growth R Sulpice, ET Pyl, H Ishihara, S Trenkamp, M Steinfath, H Witucka-Wall, ... Proceedings of the National Academy of Sciences 106 (25), 10348-10353, 2009 | 563 | 2009 |
Metabolomic and transcriptomic stress response of Escherichia coli S Jozefczuk, S Klie, G Catchpole, J Szymanski, A Cuadros‐Inostroza, ... Molecular systems biology 6 (1), 364, 2010 | 515 | 2010 |
The metabolic signature related to high plant growth rate in Arabidopsis thaliana RC Meyer, M Steinfath, J Lisec, M Becher, H Witucka-Wall, O Törjék, ... Proceedings of the National Academy of Sciences 104 (11), 4759-4764, 2007 | 430 | 2007 |
PhosPhAt : a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor JL Heazlewood, P Durek, J Hummel, J Selbig, W Weckwerth, D Walther, ... Nucleic acids research 36 (suppl_1), D1015-D1021, 2007 | 415 | 2007 |
Parallel analysis of transcript and metabolic profiles: a new approach in systems biology E Urbanczyk‐Wochniak, A Luedemann, J Kopka, J Selbig, ... EMBO reports 4 (10), 989-993, 2003 | 415 | 2003 |
Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes N Beerenwinkel, M Daumer, M Oette, K Korn, D Hoffmann, R Kaiser, ... Nucleic acids research 31 (13), 3850-3855, 2003 | 397 | 2003 |
Estimating mutual information using B-spline functions–an improved similarity measure for analysing gene expression data CO Daub, R Steuer, J Selbig, S Kloska BMC bioinformatics 5, 1-12, 2004 | 377 | 2004 |
Decision tree supported substructure prediction of metabolites from GC-MS profiles J Hummel, N Strehmel, J Selbig, D Walther, J Kopka Metabolomics 6, 322-333, 2010 | 349 | 2010 |
Metabolite fingerprinting: detecting biological features by independent component analysis M Scholz, S Gatzek, A Sterling, O Fiehn, J Selbig Bioinformatics 20 (15), 2447-2454, 2004 | 344 | 2004 |
Structural kinetic modeling of metabolic networks R Steuer, T Gross, J Selbig, B Blasius Proceedings of the National Academy of Sciences 103 (32), 11868-11873, 2006 | 322 | 2006 |
The metabolic response of heterotrophic Arabidopsis cells to oxidative stress CJ Baxter, H Redestig, N Schauer, D Repsilber, KR Patil, J Nielsen, ... Plant physiology 143 (1), 312-325, 2007 | 319 | 2007 |
Diversity and complexity of HIV-1 drug resistance: a bioinformatics approach to predicting phenotype from genotype N Beerenwinkel, B Schmidt, H Walter, R Kaiser, T Lengauer, D Hoffmann, ... Proceedings of the National Academy of Sciences 99 (12), 8271-8276, 2002 | 292 | 2002 |
Identification of metabolic and biomass QTL in Arabidopsis thaliana in a parallel analysis of RIL and IL populations J Lisec, RC Meyer, M Steinfath, H Redestig, M Becher, H Witucka‐Wall, ... The Plant Journal 53 (6), 960-972, 2008 | 277 | 2008 |
Non-linear PCA: a missing data approach M Scholz, F Kaplan, CL Guy, J Kopka, J Selbig Bioinformatics 21 (20), 3887-3895, 2005 | 269 | 2005 |