Extant fold-switching proteins are widespread LL Porter, LL Looger Proceedings of the National Academy of Sciences 115 (23), 5968-5973, 2018 | 155 | 2018 |
AlphaFold2 fails to predict protein fold switching D Chakravarty, LL Porter Protein Science 31 (6), e4353, 2022 | 120 | 2022 |
Redrawing the Ramachandran plot after inclusion of hydrogen-bonding constraints LL Porter, GD Rose Proceedings of the National Academy of Sciences 108 (1), 109-113, 2011 | 103 | 2011 |
A thermodynamic definition of protein domains LL Porter, GD Rose Proceedings of the National Academy of Sciences 109 (24), 9420-9425, 2012 | 57 | 2012 |
Structures, basins, and energies: a deconstruction of the Protein Coil Library LL Perskie, TO Street, GD Rose Protein Science 17 (7), 1151-1161, 2008 | 56 | 2008 |
Functional and regulatory roles of fold-switching proteins AK Kim, LL Porter Structure 29 (1), 6-14, 2021 | 55 | 2021 |
Amino acid signatures of HLA Class-I and II molecules are strongly associated with SLE susceptibility and autoantibody production in Eastern Asians JE Molineros, LL Looger, K Kim, Y Okada, C Terao, C Sun, X Zhou, P Raj, ... PLoS genetics 15 (4), e1008092, 2019 | 43 | 2019 |
Inaccurate secondary structure predictions often indicate protein fold switching S Mishra, LL Looger, LL Porter Protein Science 28 (8), 1487-1493, 2019 | 33 | 2019 |
Subdomain Interactions Foster the Design of Two Protein Pairs with ∼80% Sequence Identity but Different Folds LL Porter, Y He, Y Chen, O J., PN Bryan Biophysical Journal 108 (1), 154-162, 2015 | 28 | 2015 |
Many dissimilar NusG protein domains switch between α-helix and β-sheet folds LL Porter, AK Kim, S Rimal, LL Looger, A Majumdar, BD Mensh, ... Nature Communications 13 (1), 3802, 2022 | 27* | 2022 |
Counting peptide‐water hydrogen bonds in unfolded proteins H Gong, LL Porter, GD Rose Protein Science 20 (2), 417-427, 2011 | 27 | 2011 |
Physical-chemical determinants of turn conformations in globular proteins TO Street, NC Fitzkee, LL Perskie, GD Rose Protein Science 16 (8), 1720–1727, 2007 | 25 | 2007 |
AlphaFold predictions of fold-switched conformations are driven by structure memorization D Chakravarty, JW Schafer, EA Chen, JF Thole, LA Ronish, M Lee, ... Nature Communications 15 (1), 7296, 2024 | 23* | 2024 |
Evolutionary selection of proteins with two folds JW Schafer, LL Porter Biophysical Journal 122 (3), 474a, 2023 | 23 | 2023 |
A high‐throughput predictive method for sequence‐similar fold switchers AK Kim, LL Looger, LL Porter Biopolymers 112 (10), e23416, 2021 | 20* | 2021 |
Physical–chemical determinants of coil conformations in globular proteins LL Perskie, GD Rose Protein Science 19 (6), 1127-1136, 2010 | 18 | 2010 |
Identification of a covert evolutionary pathway between two protein folds D Chakravarty, S Sreenivasan, L Swint-Kruse, LL Porter Nature Communications 14 (1), 3177, 2023 | 13 | 2023 |
Predictable fold switching by the SARS‐CoV‐2 protein ORF9b LL Porter Protein Science, 2021 | 12 | 2021 |
SSDraw: software for generating comparative protein secondary structure diagrams EA Chen, LL Porter Protein Science 32 (12), e4836, 2023 | 11 | 2023 |
Distinguishing features of fold‐switching proteins D Chakravarty, JW Schafer, LL Porter Protein Science 32 (3), e4596, 2023 | 11 | 2023 |