DeepRes: a new deep-learning-and aspect-based local resolution method for electron-microscopy maps E Ramírez-Aportela, J Mota, P Conesa, JM Carazo, COS Sorzano IUCrJ 6 (6), 1054-1063, 2019 | 629 | 2019 |
Image processing tools for the validation of CryoEM maps COS Sorzano, JL Vilas, E Ramírez-Aportela, J Krieger, D Del Hoyo, ... Faraday Discussions 240, 210-227, 2022 | 581 | 2022 |
FRODOCK 2.0: fast protein–protein docking server E Ramírez-Aportela, JR López-Blanco, P Chacón Bioinformatics 32 (15), 2386-2388, 2016 | 141 | 2016 |
Automatic local resolution-based sharpening of cryo-EM maps E Ramírez-Aportela, JL Vilas, A Glukhova, R Melero, P Conesa, ... Bioinformatics 36 (3), 765-772, 2020 | 129 | 2020 |
Near-atomic cryo-EM structure of PRC1 bound to the microtubule EH Kellogg, S Howes, SC Ti, E Ramírez-Aportela, TM Kapoor, P Chacón, ... Proceedings of the National Academy of Sciences 113 (34), 9430-9439, 2016 | 91 | 2016 |
Synthetic inhibitors of bacterial cell division targeting the GTP-binding site of FtsZ LB Ruiz-Avila, S Huecas, M Artola, A Vergoñós, E Ramírez-Aportela, ... ACS chemical biology 8 (9), 2072-2083, 2013 | 80 | 2013 |
Survey of the analysis of continuous conformational variability of biological macromolecules by electron microscopy COS Sorzano, A Jiménez, J Mota, JL Vilas, D Maluenda, M Martínez, ... Acta Crystallographica Section F: Structural Biology Communications 75 (1 …, 2019 | 62 | 2019 |
Self-organization of FtsZ polymers in solution reveals spacer role of the disordered C-terminal tail S Huecas, E Ramírez-Aportela, A Vergoñós, R Núñez-Ramírez, O Llorca, ... Biophysical journal 113 (8), 1831-1844, 2017 | 47 | 2017 |
Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures R Melero, COS Sorzano, B Foster, JL Vilas, M Martínez, R Marabini, ... IUCrJ 7 (6), 1059-1069, 2020 | 45 | 2020 |
The molecular control of calcitonin receptor signaling E Dal Maso, A Glukhova, Y Zhu, J Garcia-Nafria, CG Tate, S Atanasio, ... ACS Pharmacology & Translational Science 2 (1), 31-51, 2019 | 45 | 2019 |
The structural assembly switch of cell division protein FtsZ probed with fluorescent allosteric inhibitors M Artola, LB Ruíz-Avila, E Ramírez-Aportela, RF Martínez, ... Chemical Science 8 (2), 1525-1534, 2017 | 41 | 2017 |
Effective GTP-replacing FtsZ inhibitors and antibacterial mechanism of action M Artola, LB Ruiz-Avila, A Vergoñós, S Huecas, L Araujo-Bazán, ... ACS Chemical Biology 10 (3), 834-843, 2015 | 38 | 2015 |
Structural basis for selective recognition of endogenous and microbial polysaccharides by macrophage receptor SIGN-R1 N Silva-Martín, SG Bartual, E Ramírez-Aportela, P Chacon, CG Park, ... Structure 22 (11), 1595-1606, 2014 | 38 | 2014 |
FSC-Q: a CryoEM map-to-atomic model quality validation based on the local Fourier shell correlation E Ramírez-Aportela, D Maluenda, YC Fonseca, P Conesa, R Marabini, ... Nature Communications 12 (1), 42, 2021 | 36 | 2021 |
A new algorithm for high-resolution reconstruction of single particles by electron microscopy COS Sorzano, J Vargas, JM de la Rosa-Trevín, A Jiménez, D Maluenda, ... Journal of structural biology 204 (2), 329-337, 2018 | 34 | 2018 |
Understanding nucleotide-regulated FtsZ filament dynamics and the monomer assembly switch with large-scale atomistic simulations E Ramírez-Aportela, JR López-Blanco, JM Andreu, P Chacón Biophysical journal 107 (9), 2164-2176, 2014 | 34 | 2014 |
Advances in xmipp for cryo–electron microscopy: From xmipp to scipion D Strelak, A Jiménez-Moreno, JL Vilas, E Ramírez-Aportela, ... Molecules 26 (20), 6224, 2021 | 31 | 2021 |
Using Scipion for stream image processing at Cryo-EM facilities J Gómez-Blanco, JM de la Rosa-Trevín, R Marabini, L Del Cano, ... Journal of structural biology 204 (3), 457-463, 2018 | 29 | 2018 |
Local resolution estimates of cryoEM reconstructions JL Vilas, JB Heymann, HD Tagare, E Ramírez-Aportela, JM Carazo, ... Current opinion in structural biology 64, 74-78, 2020 | 26 | 2020 |
Integration of Cryo-EM Model Building Software in Scipion M Martínez, A Jiménez-Moreno, D Maluenda, E Ramírez-Aportela, ... Journal of Chemical Information and Modeling 60 (5), 2533-2540, 2020 | 25 | 2020 |