Parmbsc1: a refined force field for DNA simulations I Ivani, PD Dans, A Noy, A Pérez, I Faustino, A Hospital, J Walther, ... Nature methods 13 (1), 55-58, 2016 | 893 | 2016 |
Local Aromaticity of [n]Acenes, [n]Phenacenes, and [n]Helicenes (n = 1−9) G Portella, J Poater, JM Bofill, P Alemany, M Sola The Journal of organic chemistry 70 (7), 2509-2521, 2005 | 254 | 2005 |
Assessment of Clar's aromatic π‐sextet rule by means of PDI, NICS and HOMA indicators of local aromaticity G Portella, J Poater, M Sola Journal of physical organic chemistry 18 (8), 785-791, 2005 | 189 | 2005 |
Molecular basis of substrate-induced permeation by an amino acid antiporter L Kowalczyk, M Ratera, A Paladino, P Bartoccioni, E Errasti-Murugarren, ... Proceedings of the National Academy of Sciences 108 (10), 3935-3940, 2011 | 159 | 2011 |
Chromatin unfolding by epigenetic modifications explained by dramatic impairment of internucleosome interactions: a multiscale computational study R Collepardo-Guevara, G Portella, M Vendruscolo, D Frenkel, T Schlick, ... Journal of the American Chemical Society 137 (32), 10205-10215, 2015 | 151 | 2015 |
How accurate are accurate force-fields for B-DNA? PD Dans, I Ivani, A Hospital, G Portella, C González, M Orozco Nucleic Acids Research 45 (7), 4217-4230, 2017 | 132 | 2017 |
RNA G-quadruplexes at upstream open reading frames cause DHX36-and DHX9-dependent translation of human mRNAs P Murat, G Marsico, B Herdy, A Ghanbarian, G Portella, ... Genome biology 19, 1-24, 2018 | 122 | 2018 |
5-Formylcytosine organizes nucleosomes and forms Schiff base interactions with histones in mouse embryonic stem cells EA Raiber, G Portella, S Martínez Cuesta, R Hardisty, P Murat, Z Li, ... Nature chemistry 10 (12), 1258-1266, 2018 | 98 | 2018 |
Differential stability of 2′ F-ANA• RNA and ANA• RNA hybrid duplexes: roles of structure, pseudohydrogen bonding, hydration, ion uptake and flexibility JK Watts, N Martín-Pintado, I Gomez-Pinto, J Schwartzentruber, G Portella, ... Nucleic acids research 38 (7), 2498-2511, 2010 | 89 | 2010 |
Dramatic effect of furanose C2′ substitution on structure and stability: directing the folding of the human telomeric quadruplex with a single fluorine atom N Martín-Pintado, M Yahyaee-Anzahaee, GF Deleavey, G Portella, ... Journal of the American Chemical Society 135 (14), 5344-5347, 2013 | 80 | 2013 |
Time averaging of NMR chemical shifts in the MLF peptide in the solid state ID Gortari, G Portella, X Salvatella, VS Bajaj, PCA van der Wel, JR Yates, ... Journal of the American Chemical Society 132 (17), 5993-6000, 2010 | 76 | 2010 |
Structure of triplex DNA in the gas phase A Arcella, G Portella, ML Ruiz, R Eritja, M Vilaseca, V Gabelica, M Orozco Journal of the American Chemical Society 134 (15), 6596-6606, 2012 | 69 | 2012 |
Backbone FC H⋅⋅⋅ O Hydrogen Bonds in 2′ F-Substituted Nucleic Acids. N Martin‐Pintado, GF Deleavey, G Portella, R Campos‐Olivas, M Orozco, ... Angewandte Chemie International Edition 52 (46), 2013 | 63 | 2013 |
Understanding the connection between epigenetic DNA methylation and nucleosome positioning from computer simulations G Portella, F Battistini, M Orozco PLoS computational biology 9 (11), e1003354, 2013 | 62 | 2013 |
G-quadruplex DNA structures in human stem cells and differentiation KG Zyner, A Simeone, SM Flynn, C Doyle, G Marsico, S Adhikari, ... Nature Communications 13 (1), 142, 2022 | 54 | 2022 |
Mobility of a one-dimensional confined file of water molecules as a function of file length SM Saparov, JR Pfeifer, L Al-Momani, G Portella, BL de Groot, U Koert, ... Physical review letters 96 (14), 148101, 2006 | 54 | 2006 |
MD and NMR analyses of choline and TMA binding to duplex DNA: on the origins of aberrant sequence-dependent stability by alkyl cations in aqueous and water-free solvents G Portella, MW Germann, NV Hud, M Orozco Journal of the American Chemical Society 136 (8), 3075-3086, 2014 | 51 | 2014 |
The RNF168 paralog RNF169 defines a new class of ubiquitylated histone reader involved in the response to DNA damage J Kitevski-LeBlanc, A Fradet-Turcotte, P Kukic, MD Wilson, G Portella, ... Elife 6, e23872, 2017 | 50 | 2017 |
Multiple routes to characterize the folding of a small DNA hairpin G Portella, M Orozco Angewandte Chemie 122 (42), 7839-7842, 2010 | 48 | 2010 |
Structure and dynamics of oligonucleotides in the gas phase A Arcella, J Dreyer, E Ippoliti, I Ivani, G Portella, V Gabelica, P Carloni, ... Angewandte Chemie International Edition 54 (2), 467-471, 2015 | 47 | 2015 |