Nanopore sequencing data analysis: state of the art, applications and challenges A Magi, R Semeraro, A Mingrino, B Giusti, R D’aurizio Briefings in bioinformatics 19 (6), 1256-1272, 2018 | 196 | 2018 |
DuctApe: a suite for the analysis and correlation of genomic and OmniLog™ phenotype microarray data M Galardini, A Mengoni, EG Biondi, R Semeraro, A Florio, M Bazzicalupo, ... Genomics 103 (1), 1-10, 2014 | 73 | 2014 |
Acute kidney injury promotes development of papillary renal cell adenoma and carcinoma from renal progenitor cells AJ Peired, G Antonelli, ML Angelotti, M Allinovi, F Guzzi, A Sisti, ... Science translational medicine 12 (536), eaaw6003, 2020 | 70 | 2020 |
Nanopore sequencing from liquid biopsy: analysis of copy number variations from cell-free DNA of lung cancer patients F Martignano, U Munagala, S Crucitta, A Mingrino, R Semeraro, M Del Re, ... Molecular cancer 20, 1-6, 2021 | 43 | 2021 |
β3‐Adrenoreceptors Control Mitochondrial Dormancy in Melanoma and Embryonic Stem Cells M Calvani, L Cavallini, A Tondo, V Spinelli, L Ricci, A Pasha, G Bruno, ... Oxidative Medicine and Cellular Longevity 2018 (1), 6816508, 2018 | 39 | 2018 |
Tubular cell polyploidy protects from lethal acute kidney injury but promotes consequent chronic kidney disease L De Chiara, C Conte, R Semeraro, P Diaz-Bulnes, ML Angelotti, ... Nature communications 13 (1), 5805, 2022 | 33 | 2022 |
Differentiation of crescent-forming kidney progenitor cells into podocytes attenuates severe glomerulonephritis in mice ME Melica, G Antonelli, R Semeraro, ML Angelotti, G Lugli, S Landini, ... Science Translational Medicine 14 (657), eabg3277, 2022 | 33 | 2022 |
Heterogeneous magnitude of immunological memory to SARS‐CoV‐2 in recovered individuals A Mazzoni, L Maggi, M Capone, A Vanni, M Spinicci, L Salvati, ... Clinical & Translational Immunology 10 (5), e1281, 2021 | 26 | 2021 |
Nano-GLADIATOR: real-time detection of copy number alterations from nanopore sequencing data A Magi, D Bolognini, N Bartalucci, A Mingrino, R Semeraro, L Giovannini, ... Bioinformatics 35 (21), 4213-4221, 2019 | 26 | 2019 |
Characterization and identification of hidden rare variants in the human genome A Magi, R D’Aurizio, F Palombo, I Cifola, L Tattini, R Semeraro, T Pippucci, ... BMC genomics 16, 1-16, 2015 | 25 | 2015 |
Agreement between equations estimating glomerular filtration rate in elderly nursing home residents and in hospitalised patients: implications for drug dosing A Corsonello, C Pedone, F Lattanzio, R Semeraro, F D'Andria, M Gigante, ... Age and ageing 40 (5), 583-589, 2011 | 24 | 2011 |
Reliability of equations to estimate glomerular filtration rate in the very old C Pedone, R Semeraro, D Chiurco, F D’Andria, M Gigante, A Coppola, ... Aging clinical and experimental research 20, 496-502, 2008 | 19 | 2008 |
From multitude to singularity: An up-to-date overview of scRNA-seq data generation and analysis G Carangelo, A Magi, R Semeraro Frontiers in Genetics 13, 994069, 2022 | 15 | 2022 |
Xome-Blender: a novel cancer genome simulator R Semeraro, V Orlandini, A Magi PloS one 13 (4), e0194472, 2018 | 14 | 2018 |
Aggressive behavior of classical Kaposi's sarcoma and coexistence with angiosarcoma G Gambassi, R Semeraro, V Suma, AM Sebastio, R Antonelli Incalzi The Journals of Gerontology Series A: Biological Sciences and Medical …, 2005 | 11 | 2005 |
PyPore: a python toolbox for nanopore sequencing data handling R Semeraro, A Magi Bioinformatics 35 (21), 4445-4447, 2019 | 10 | 2019 |
Clonally expanded PD‐1‐expressing T cells are enriched in synovial fluid of juvenile idiopathic arthritis patients A Vanni, A Mazzoni, R Semeraro, M Capone, P Maschmeyer, ... European journal of immunology 53 (7), 2250162, 2023 | 8 | 2023 |
Using XCAVATOR and EXCAVATOR2 to identify CNVs from WGS, WES, and TS data R D'Aurizio, R Semeraro, A Magi Current Protocols in Human Genetics 98 (1), e65, 2018 | 7 | 2018 |
No NLRP3 inflammasome activity in kidney epithelial cells, not even when the NLRP3-A350V Muckle-Wells variant is expressed in podocytes of diabetic mice SC Kunte, JA Marschner, M Klaus, T Honda, C Li, M Motrapu, C Walz, ... Frontiers in Immunology 14, 1230050, 2023 | 6 | 2023 |
Involvement of RUNX1 pathway is a common event in the leukemic transformation of chronic myeloproliferative neoplasms (MPNs) P Guglielmelli, N Bartalucci, E Contini, G Rotunno, A Pacilli, S Romagnoli, ... Blood 134, 2968, 2019 | 5 | 2019 |