| Control systems for membrane fusion in the ancestral eukaryote; evolution of tethering complexes and SM proteins VL Koumandou, JB Dacks, RMR Coulson, MC Field BMC evolutionary biology 7, 1-17, 2007 | 254 | 2007 |
| Molecular paleontology and complexity in the last eukaryotic common ancestor VL Koumandou, B Wickstead, ML Ginger, M Van Der Giezen, JB Dacks, ... Critical reviews in biochemistry and molecular biology 48 (4), 373-396, 2013 | 225 | 2013 |
| Evolution of the chloroplast genome CJ Howe, AC Barbrook, VL Koumandou, RER Nisbet, HA Symington, ... Philosophical Transactions of the Royal Society of London. Series B …, 2003 | 192 | 2003 |
| Evolutionary reconstruction of the retromer complex and its function in Trypanosoma brucei VL Koumandou, MJ Klute, EK Herman, R Nunez-Miguel, JB Dacks, ... Journal of cell science 124 (9), 1496-1509, 2011 | 135 | 2011 |
| The trypanosome transcriptome is remodelled during differentiation but displays limited responsiveness within life stages VL Koumandou, SKA Natesan, T Sergeenko, MC Field BMC genomics 9, 1-28, 2008 | 116 | 2008 |
| Species‐specific physiological response of dinoflagellates to quantified small‐scale turbulence1 E Berdalet, F Peters, VL Koumandou, C Roldan, O Guadayol, M Estrada Journal of Phycology 43 (5), 965-977, 2007 | 104 | 2007 |
| The Streamlined Genome of Phytomonas spp. Relative to Human Pathogenic Kinetoplastids Reveals a Parasite Tailored for Plants BM Porcel, F Denoeud, F Opperdoes, B Noel, MA Madoui, TC Hammarton, ... PLoS genetics 10 (2), e1004007, 2014 | 100 | 2014 |
| Dinoflagellate chloroplasts–where have all the genes gone? VL Koumandou, RER Nisbet, AC Barbrook, CJ Howe Trends in Genetics 20 (5), 261-267, 2004 | 83 | 2004 |
| Evolution of the plasma and tissue kallikreins, and their alternative splicing isoforms VL Koumandou, A Scorilas PLoS One 8 (7), e68074, 2013 | 72 | 2013 |
| Novel plastid gene minicircles in the dinoflagellate Amphidinium operculatum RER Nisbet, VL Koumandou, AC Barbrook, CJ Howe Gene 331, 141-147, 2004 | 45 | 2004 |
| The copy number of chloroplast gene minicircles changes dramatically with growth phase in the dinoflagellate Amphidinium operculatum VL Koumandou, CJ Howe Protist 158 (1), 89-103, 2007 | 44 | 2007 |
| Evolution of the F0F1 ATP Synthase Complex in Light of the Patchy Distribution of Different Bioenergetic Pathways across Prokaryotes VL Koumandou, S Kossida PLoS computational biology 10 (9), e1003821, 2014 | 42 | 2014 |
| A holistic evolutionary and structural study of flaviviridae provides insights into the function and inhibition of HCV helicase D Vlachakis, VL Koumandou, S Kossida PeerJ 1, e74, 2013 | 42 | 2013 |
| Structural models for the design of novel antiviral agents against Greek Goat Encephalitis L Papageorgiou, S Loukatou, VL Koumandou, W Makałowski, ... PeerJ 2, e664, 2014 | 27 | 2014 |
| Evidence for recycling of invariant surface transmembrane domain proteins in African trypanosomes VL Koumandou, C Boehm, KA Horder, MC Field Eukaryotic Cell 12 (2), 330-342, 2013 | 26 | 2013 |
| Evolution of two-component quorum sensing systems M Giannakara, VL Koumandou Access microbiology 4 (1), 000303, 2022 | 12 | 2022 |
| Computer-aided drug design and biological evaluation of novel anti-Greek goat encephalitis agents L Papageorgiou, D Vlachakis, VL Koumandou, N Papangelopoulos, ... International Journal of Systems Biology and Biomedical Technologies (IJSBBT …, 2013 | 12 | 2013 |
| Evolution of factors shaping the endoplasmic reticulum A Kontou, EK Herman, MC Field, JB Dacks, VL Koumandou Traffic 23 (9), 462-473, 2022 | 9 | 2022 |
| Protein functional links in Trypanosoma brucei, identified by gene fusion analysis D Dimitriadis, VL Koumandou, P Trimpalis, S Kossida BMC Evolutionary Biology 11, 1-15, 2011 | 8 | 2011 |
| Conservation biology of threatened Mediterranean chasmophytes: The case of Asperula naufraga endemic to Zakynthos island (Ionian islands, Greece) AT Valli, VL Koumandou, G Iatrou, M Andreou, V Papasotiropoulos, ... Plos one 16 (2), e0246706, 2021 | 7 | 2021 |
